Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GO004_RS19615 Genome accession   NZ_CP046591
Coordinates   3773693..3774388 (+) Length   231 a.a.
NCBI ID   WP_088467346.1    Uniprot ID   -
Organism   Bacillus subtilis strain R31     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3768693..3779388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS19590 (GO004_19590) ytrB 3768721..3769599 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  GO004_RS19595 (GO004_19595) ytrC 3769593..3770579 (+) 987 WP_015714563.1 ABC transporter permease YtrC -
  GO004_RS19600 (GO004_19600) ytrD 3770609..3771586 (+) 978 WP_032722368.1 ABC transporter permease YtrD -
  GO004_RS19605 (GO004_19605) ytrE 3771601..3772296 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  GO004_RS19610 (GO004_19610) ytrF 3772286..3773596 (+) 1311 WP_004398682.1 ABC transporter permease YtrF -
  GO004_RS19615 (GO004_19615) braR 3773693..3774388 (+) 696 WP_088467346.1 two-component response regulator BceR Regulator
  GO004_RS19620 (GO004_19620) bceS 3774381..3775385 (+) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  GO004_RS19625 (GO004_19625) bceA 3775487..3776248 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  GO004_RS19630 (GO004_19630) bceB 3776238..3778178 (+) 1941 WP_088467345.1 bacitracin ABC transporter permease BceB -
  GO004_RS19635 (GO004_19635) yttA 3778215..3778961 (-) 747 WP_015714557.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=353657 GO004_RS19615 WP_088467346.1 3773693..3774388(+) (braR) [Bacillus subtilis strain R31]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDVEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=353657 GO004_RS19615 WP_088467346.1 3773693..3774388(+) (braR) [Bacillus subtilis strain R31]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGTGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAACGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377