Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GO004_RS14770 Genome accession   NZ_CP046591
Coordinates   2823084..2823773 (+) Length   229 a.a.
NCBI ID   WP_029318588.1    Uniprot ID   -
Organism   Bacillus subtilis strain R31     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2818084..2828773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS14750 (GO004_14740) iolG 2819238..2820272 (+) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  GO004_RS14755 (GO004_14745) iolH 2820292..2821161 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  GO004_RS14760 (GO004_14750) iolI 2821247..2822083 (+) 837 WP_003227070.1 2-keto-myo-inositol isomerase -
  GO004_RS14765 (GO004_14755) iolJ 2822104..2822976 (+) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  GO004_RS14770 (GO004_14760) braR 2823084..2823773 (+) 690 WP_029318588.1 two-component system response regulator YxdJ Regulator
  GO004_RS14775 (GO004_14765) yxdK 2823770..2824747 (+) 978 WP_003227076.1 two-component system sensor histidine kinase YxdK -
  GO004_RS14780 (GO004_14770) yxdL 2824891..2825664 (+) 774 WP_032676945.1 ABC transporter ATP-binding protein YxdL -
  GO004_RS14785 (GO004_14775) yxdM 2825639..2827507 (+) 1869 WP_129010265.1 ABC transporter permease YxdM -
  GO004_RS14790 (GO004_14780) yxeA 2827521..2827868 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26584.38 Da        Isoelectric Point: 4.9502

>NTDB_id=353632 GO004_RS14770 WP_029318588.1 2823084..2823773(+) (braR) [Bacillus subtilis strain R31]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSLLSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=353632 GO004_RS14770 WP_029318588.1 2823084..2823773(+) (braR) [Bacillus subtilis strain R31]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGTGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCTTGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(153-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406