Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GO004_RS13830 Genome accession   NZ_CP046591
Coordinates   2642846..2643673 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain R31     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2637846..2648673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS13805 (GO004_13795) abrB 2640192..2640482 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  GO004_RS13810 (GO004_13800) rsmI 2640531..2641409 (-) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GO004_RS13815 (GO004_13805) yazA 2641384..2641683 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  GO004_RS13820 (GO004_13810) trmNF 2641670..2642413 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  GO004_RS13825 (GO004_13815) yabA 2642472..2642831 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  GO004_RS13830 (GO004_13820) yaaT 2642846..2643673 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  GO004_RS13835 (GO004_13825) holB 2643676..2644665 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  GO004_RS13840 (GO004_13830) yaaR 2644677..2645117 (-) 441 WP_009966249.1 YaaR family protein -
  GO004_RS13845 (GO004_13835) darA 2645130..2645459 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  GO004_RS13850 (GO004_13840) tmk 2645533..2646171 (-) 639 WP_015715093.1 dTMP kinase -
  GO004_RS13855 (GO004_13845) efpO 2646168..2647610 (-) 1443 WP_015715092.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=353624 GO004_RS13830 WP_003243571.1 2642846..2643673(-) (yaaT) [Bacillus subtilis strain R31]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=353624 GO004_RS13830 WP_003243571.1 2642846..2643673(-) (yaaT) [Bacillus subtilis strain R31]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1