Detailed information NTG0353560

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GO004_RS05580
• Genome accession: NZ_CP046591
• Coordinates: 1041949..1042938 (-)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain R31
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1036949..1047938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO004_RS05540 (GO004_05510)	trmD	1037176..1037907 (-)	732	WP_015715877.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GO004_RS05545 (GO004_05515)	rimM	1037904..1038428 (-)	525	WP_003232013.1	ribosome maturation factor RimM	-
GO004_RS05550 (GO004_05520)	ylqD	1038433..1038819 (-)	387	WP_014476793.1	YlqD family protein	-
GO004_RS05555 (GO004_05525)	khpA	1038941..1039186 (-)	246	WP_014476792.1	KH domain-containing protein	-
GO004_RS05560 (GO004_05530)	rpsP	1039186..1039458 (-)	273	WP_003220815.1	30S ribosomal protein S16	-
GO004_RS05565 (GO004_05535)	ffh	1039564..1040904 (-)	1341	WP_003232020.1	signal recognition particle protein	-
GO004_RS05570 (GO004_05540)	srpM	1040918..1041250 (-)	333	WP_003238590.1	putative DNA-binding protein	-
GO004_RS05575 (GO004_05545)	sivC	1041427..1041912 (+)	486	WP_003245834.1	Ig-like domain-containing protein	-
GO004_RS05580 (GO004_05550)	pilA	1041949..1042938 (-)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
GO004_RS05585 (GO004_05555)	smc	1042958..1046518 (-)	3561	WP_015715874.1	chromosome segregation protein SMC	-
GO004_RS05590 (GO004_05560)	rncS	1046619..1047368 (-)	750	WP_003232030.1	ribonuclease III	-
GO004_RS05595 (GO004_05565)	acpP	1047508..1047741 (-)	234	WP_003154310.1	acyl carrier protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=353560 GO004_RS05580 WP_003232026.1 1041949..1042938(-) (pilA) [Bacillus subtilis strain R31]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=353560 GO004_RS05580 WP_003232026.1 1041949..1042938(-) (pilA) [Bacillus subtilis strain R31]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGTGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCAGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401