Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GO004_RS03780 Genome accession   NZ_CP046591
Coordinates   687759..688376 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain R31     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 682759..693376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS03745 (GO004_03730) ynzD 683001..683174 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  GO004_RS03750 (GO004_03735) yneF 683248..683466 (-) 219 WP_003221221.1 YneF family protein -
  GO004_RS03755 (GO004_03740) sirA 683552..683998 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GO004_RS03760 (GO004_03745) recP/tkt 684151..686154 (-) 2004 WP_015714012.1 transketolase Machinery gene
  GO004_RS03765 (GO004_03750) ynzC 686323..686556 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  GO004_RS03770 (GO004_03755) dinL 686620..687273 (-) 654 WP_015714011.1 recombinase family protein -
  GO004_RS03775 (GO004_03760) yneA 687292..687609 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  GO004_RS03780 (GO004_03765) dinR/lexA 687759..688376 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GO004_RS21765 - 688728..689005 (-) 278 Protein_758 hypothetical protein -
  GO004_RS03785 (GO004_03770) fosM 688914..689348 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GO004_RS03790 (GO004_03775) - 689556..690005 (+) 450 WP_003245454.1 YndM family protein -
  GO004_RS03795 (GO004_03780) pghL 690032..690790 (-) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  GO004_RS03800 (GO004_03785) - 691015..691329 (-) 315 WP_029726671.1 hypothetical protein -
  GO004_RS03805 (GO004_03790) yndJ 691407..693047 (-) 1641 WP_015714004.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=353551 GO004_RS03780 WP_003238209.1 687759..688376(+) (dinR/lexA) [Bacillus subtilis strain R31]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=353551 GO004_RS03780 WP_003238209.1 687759..688376(+) (dinR/lexA) [Bacillus subtilis strain R31]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1