Detailed information NTG0353188

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GOE21_RS18585
• Genome accession: NZ_CP046539
• Coordinates: 3789064..3790047 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain FHI_NMBU_10
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3784064..3795047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOE21_RS18570 (GOE21_18565)	dppA	3785364..3786971 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
GOE21_RS18575 (GOE21_18570)	dppB	3787122..3788141 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GOE21_RS18580 (GOE21_18575)	dppC	3788151..3789053 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GOE21_RS18585 (GOE21_18580)	amiE	3789064..3790047 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GOE21_RS18590 (GOE21_18585)	dppF	3790044..3791048 (+)	1005	WP_000107024.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GOE21_RS18595 (GOE21_18590)	yhjV	3791078..3792349 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
GOE21_RS18600 (GOE21_18595)	-	3792825..3792932 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GOE21_RS18605 (GOE21_18600)	-	3793308..3793415 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GOE21_RS18610 (GOE21_18605)	-	3793791..3793898 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=353188 GOE21_RS18585 WP_001196486.1 3789064..3790047(+) (amiE) [Escherichia coli strain FHI_NMBU_10]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=353188 GOE21_RS18585 WP_001196486.1 3789064..3790047(+) (amiE) [Escherichia coli strain FHI_NMBU_10]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404