Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   E4T55_RS04045 Genome accession   NZ_CP038273
Coordinates   918363..921095 (+) Length   910 a.a.
NCBI ID   WP_135121914.1    Uniprot ID   -
Organism   Legionella israelensis strain Bercovier 4     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 913363..926095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4T55_RS04030 (E4T55_04030) - 915292..916002 (-) 711 WP_058502251.1 glutathione S-transferase C-terminal domain-containing protein -
  E4T55_RS04035 (E4T55_04035) - 916126..916614 (+) 489 WP_058502250.1 YchJ family metal-binding protein -
  E4T55_RS04040 (E4T55_04040) gltX 916674..918086 (-) 1413 WP_058502249.1 glutamate--tRNA ligase -
  E4T55_RS04045 (E4T55_04045) letS 918363..921095 (+) 2733 WP_135121914.1 two-component system sensor histidine kinase LetS Regulator
  E4T55_RS04050 (E4T55_04050) - 921125..922375 (+) 1251 WP_058502247.1 6-phosphofructokinase -
  E4T55_RS04055 (E4T55_04055) pilA2 923097..923513 (-) 417 WP_172460993.1 pilin Machinery gene
  E4T55_RS04060 (E4T55_04060) - 923754..924206 (-) 453 WP_058502245.1 hypothetical protein -
  E4T55_RS04065 (E4T55_04065) - 924482..924802 (+) 321 WP_316409773.1 BolA family protein -
  E4T55_RS04070 (E4T55_04070) - 924795..925226 (+) 432 WP_058502244.1 secondary thiamine-phosphate synthase enzyme YjbQ -

Sequence


Protein


Download         Length: 910 a.a.        Molecular weight: 103270.47 Da        Isoelectric Point: 7.7284

>NTDB_id=353061 E4T55_RS04045 WP_135121914.1 918363..921095(+) (letS) [Legionella israelensis strain Bercovier 4]
MKSLGIKYQLRITTLIPVLLVALLFALFYNGQFSKDLKQHMSRLGEAYIRQLMPAAQYALQQDNHRTLQGLINASTINQE
VKAVAFYDANGRLLAYRGGKHSLKKPFTPPAFTGDFIESKQLNSTTINFFAPITIPKYNLYSTDILRPSTQNFILQPDDI
LGWLSINIDTQSMLIKRYQMMIVTIFITLFGLLIGLATHYFLSKRIYMPISRLRRSMKQILRNEFETEIRVSSAGELGVI
EEGCAHLQKQYLDTIRDLNHHIEVATADLQQSLELLEEKNIELSMEKKKSEEKNRQKSEFIANMSHEIRTPMNGVIGFTN
VLLESKLDPLQLDYVKTIKTSAQDLLQIINDILDYSKMDAGKLHLDCIPLDIRACIDEVLVLSAPNAHKKGIDLIPITSL
EVPRTVLGDPLRIKQIISNLVNNAIKFTDKGYVLIRTEVEQEMANDYLLRISVSDTGIGISKEDQSKLFTAFNQADTSIT
RRYGGSGLGLVICKKLAEEMKGRISLSSELHKGSTFSVHIRVEKLSSYEVEKNQNYRFAHLKVLCFDENRLQLESITNGL
GHWGIQCATVNALDKLAKALEHNKNCDFAFINVKQGYEAQIADLLKAHPNKTYILVSKWPIADVKSFGAQAFLYQPISIQ
KLHDIIESLMHQPSVPPSVPQEVENLREQLRFSHPDILIAEDNPVNRMLLNSLLGENANMESVSDGEQAVVICNEKRFQV
ILLDLQMPKLNGLEAAKKIRHESLLNRHTPILLLSASSTDINRDKLKNAGIDHCLHKPVEEKQLISHLLRLMDKAQHAAI
DWSLCVQKLSGNQKLAEDFLARFVEELKKDRLELIQLMRDKNIRGLASAAHKLHGACSFCGVPMLQKKVREFEIMTQQVK
NSEDLRSLFAELVQRIDAVIDEYENYYSES

Nucleotide


Download         Length: 2733 bp        

>NTDB_id=353061 E4T55_RS04045 WP_135121914.1 918363..921095(+) (letS) [Legionella israelensis strain Bercovier 4]
TTGAAAAGCCTTGGTATTAAATACCAGCTCAGGATTACAACACTTATTCCTGTGCTTCTCGTCGCTTTATTGTTTGCCTT
ATTTTATAACGGTCAATTCAGCAAAGATTTAAAACAACACATGTCACGTCTCGGCGAAGCTTACATTCGCCAATTAATGC
CAGCTGCTCAGTATGCCTTACAGCAGGATAACCATCGGACTCTGCAAGGGCTCATTAACGCTTCTACCATCAATCAGGAA
GTGAAAGCCGTTGCTTTCTACGATGCCAATGGACGTCTGCTCGCTTATCGCGGAGGAAAACATTCTCTGAAAAAACCCTT
TACTCCTCCAGCCTTTACCGGTGATTTTATAGAAAGCAAGCAACTGAATTCCACCACCATTAATTTTTTCGCCCCCATCA
CTATCCCAAAATATAACTTATATTCCACGGATATACTGAGACCTTCAACCCAGAATTTTATTTTACAGCCAGATGATATT
TTGGGATGGCTGTCTATCAATATTGATACCCAATCCATGTTGATCAAGCGCTATCAAATGATGATTGTTACGATTTTTAT
TACGCTGTTTGGATTACTGATTGGCTTGGCCACGCATTATTTTTTGTCAAAACGCATTTATATGCCTATCAGCCGATTAC
GCAGGAGCATGAAACAGATTTTAAGGAATGAATTTGAGACAGAAATTCGGGTTTCAAGCGCAGGGGAGCTGGGTGTTATT
GAGGAGGGCTGTGCCCATTTGCAGAAACAATATCTCGACACCATACGTGATCTGAATCATCATATTGAAGTGGCCACGGC
TGACCTGCAACAAAGCCTTGAATTGCTGGAAGAAAAAAACATCGAATTATCGATGGAGAAGAAAAAATCAGAAGAAAAAA
ACCGGCAAAAATCAGAATTCATTGCCAACATGAGCCATGAAATCCGTACCCCTATGAATGGGGTGATTGGTTTTACTAAC
GTATTGCTGGAAAGTAAACTGGATCCCTTACAGCTCGATTATGTTAAAACGATCAAAACTTCTGCTCAGGATCTATTACA
AATCATCAACGACATTCTTGATTATTCAAAAATGGATGCCGGTAAACTCCATCTCGACTGTATACCTCTTGACATACGGG
CCTGCATTGATGAAGTTCTTGTTCTCTCTGCTCCCAATGCTCACAAAAAAGGCATTGACTTGATTCCAATTACCTCTCTC
GAGGTTCCAAGAACGGTTCTCGGTGATCCATTACGCATTAAACAAATCATATCCAATCTGGTGAACAACGCCATAAAATT
CACCGATAAAGGATACGTTCTTATCCGAACCGAGGTTGAGCAGGAGATGGCAAATGATTACCTGCTTCGCATCTCTGTAT
CCGATACCGGCATCGGGATTTCAAAAGAGGATCAGAGTAAATTATTTACAGCCTTCAATCAGGCCGATACCAGCATTACC
CGTCGCTACGGCGGCTCCGGCCTTGGCCTTGTCATTTGCAAGAAACTGGCTGAAGAAATGAAAGGACGCATCAGTCTGAG
TAGTGAATTACATAAAGGCTCAACCTTCTCCGTTCATATTCGTGTGGAGAAACTCTCATCCTATGAAGTTGAAAAAAATC
AGAATTATCGTTTTGCTCATCTTAAAGTGTTATGCTTTGACGAAAACAGACTGCAACTGGAATCCATTACCAATGGCTTA
GGCCACTGGGGCATACAATGCGCTACTGTCAATGCCCTTGACAAATTAGCCAAAGCCTTAGAGCATAATAAAAATTGCGA
TTTCGCCTTTATTAACGTCAAACAGGGATATGAAGCGCAGATTGCCGATCTTCTCAAAGCTCACCCGAATAAAACTTACA
TTCTTGTTTCAAAATGGCCAATTGCGGATGTCAAATCCTTCGGCGCACAAGCTTTTTTATACCAACCCATTAGCATTCAG
AAACTTCATGACATTATTGAATCCCTAATGCATCAACCATCAGTCCCCCCTTCAGTGCCTCAGGAAGTTGAAAATTTGAG
AGAACAACTGAGATTTTCTCATCCTGATATCCTGATAGCGGAAGATAATCCGGTCAACCGTATGTTGTTAAACTCCCTGC
TCGGTGAAAATGCAAATATGGAATCAGTAAGTGATGGTGAGCAAGCAGTCGTAATCTGTAATGAAAAACGTTTCCAGGTC
ATACTCCTCGATCTGCAAATGCCAAAGCTCAACGGACTTGAAGCTGCCAAAAAAATTCGACATGAATCTTTACTCAATCG
TCATACGCCTATTCTTTTATTAAGCGCCAGCAGTACCGATATTAACCGCGATAAATTAAAAAACGCCGGTATTGATCATT
GCCTGCATAAGCCTGTTGAGGAAAAACAACTCATCAGTCATTTACTTCGTTTGATGGACAAGGCTCAACACGCAGCCATC
GACTGGTCCTTATGCGTGCAGAAACTGTCCGGTAACCAGAAGCTCGCTGAAGATTTTCTCGCCCGTTTTGTAGAAGAATT
AAAAAAAGACCGGCTTGAATTGATTCAGTTGATGCGCGACAAAAACATTCGTGGTCTTGCCAGTGCCGCACACAAATTAC
ATGGGGCCTGCAGTTTCTGTGGCGTTCCTATGTTGCAGAAAAAAGTAAGGGAATTTGAAATCATGACCCAGCAGGTCAAA
AATTCAGAAGATTTACGCTCACTTTTCGCTGAATTAGTCCAGCGTATTGACGCCGTTATTGATGAATATGAAAATTATTA
CAGCGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

71.067

99.89

0.71


Multiple sequence alignment