Detailed information NTG0353043

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E4T54_RS07300
• Genome accession: NZ_CP038271
• Coordinates: 1664043..1665071 (+)
• Length: 342 a.a.
• NCBI ID: WP_028387252.1
• Uniprot ID: -
• Organism: Legionella geestiana strain 1308
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1659043..1670071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4T54_RS07275 (E4T54_07275)	-	1659297..1660238 (-)	942	WP_028387257.1	type IV secretion system DotC family protein	-
E4T54_RS07280 (E4T54_07280)	dotD	1660219..1660704 (-)	486	WP_035903748.1	type IVB secretion system lipoprotein DotD	-
E4T54_RS07285 (E4T54_07285)	rsmD	1660812..1661357 (-)	546	WP_028387255.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E4T54_RS07290 (E4T54_07290)	-	1661354..1662661 (-)	1308	WP_028387254.1	pitrilysin family protein	-
E4T54_RS07295 (E4T54_07295)	-	1662661..1663983 (-)	1323	WP_028387253.1	pitrilysin family protein	-
E4T54_RS07300 (E4T54_07300)	pilA	1664043..1665071 (+)	1029	WP_028387252.1	signal recognition particle-docking protein FtsY	Machinery gene
E4T54_RS07305 (E4T54_07305)	ftsE	1665076..1665726 (+)	651	WP_028387251.1	cell division ATP-binding protein FtsE	-
E4T54_RS07310 (E4T54_07310)	ftsX	1665720..1666652 (+)	933	WP_028387250.1	permease-like cell division protein FtsX	-
E4T54_RS07315 (E4T54_07315)	rpoH	1666746..1667597 (+)	852	WP_028387249.1	RNA polymerase sigma factor RpoH	-
E4T54_RS07320 (E4T54_07320)	-	1667663..1668322 (+)	660	WP_028387248.1	hypothetical protein	-
E4T54_RS07325 (E4T54_07325)	aceA	1668362..1669660 (-)	1299	WP_202971948.1	isocitrate lyase	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37207.58 Da
• Isoelectric Point: 6.2462

>NTDB_id=353043 E4T54_RS07300 WP_028387252.1 1664043..1665071(+) (pilA) [Legionella geestiana strain 1308]
MMKWFKRNTTPEAPTSHEPGTQVALEAPRGIFERFREGLGKTRHQLGERIGRLFLGRKEISPELLEELETLLISADVGID
TATRLTDALRARLARHQLKDSEALFTTLEEDLRAILAPCAQPLEPMTPDASPFVILMVGINGAGKTTTAGKLARHFREQG
KRVMLAAGDTFRAAAVEQLQAWGERNDVAVVAQSTGADSASVVFDAFQSAKARGMDILIADTAGRLHTQGNLMEELRKIR
RVLQKIDPAAPHETMLVLDAGIGQNAVNQAREFHEAVAVSGITMTKLDGTARGGILLAIADTLKIPLRFVGMGEGIDDLR
PFDANAYVRAILGHDDVPEHGE

Nucleotide

• Length: 1029 bp

>NTDB_id=353043 E4T54_RS07300 WP_028387252.1 1664043..1665071(+) (pilA) [Legionella geestiana strain 1308]
ATGATGAAATGGTTTAAGCGAAACACCACGCCCGAAGCTCCGACCTCACACGAGCCCGGCACGCAGGTTGCCCTAGAAGC
GCCTCGCGGGATTTTTGAACGCTTTCGAGAGGGGCTTGGAAAGACGCGCCACCAGCTTGGGGAGCGCATTGGCCGACTGT
TTCTCGGGCGTAAGGAAATCAGCCCCGAACTTCTTGAAGAGCTGGAGACGCTGCTTATCAGCGCGGATGTCGGCATTGAC
ACTGCTACGCGGCTTACTGATGCGCTGCGGGCACGCCTCGCGCGCCATCAGTTGAAAGATTCAGAGGCACTCTTTACGAC
ACTGGAAGAAGACCTGCGTGCGATTCTTGCCCCCTGTGCCCAGCCGCTCGAACCAATGACTCCCGATGCCAGTCCCTTTG
TGATTCTTATGGTCGGCATTAACGGCGCCGGTAAAACGACTACGGCCGGAAAACTGGCCCGCCACTTTCGCGAGCAGGGC
AAGCGGGTGATGCTGGCTGCAGGTGACACGTTTCGTGCTGCGGCGGTTGAGCAGTTGCAGGCCTGGGGCGAGCGTAACGA
TGTCGCGGTGGTCGCGCAGAGCACCGGTGCTGACAGCGCATCGGTGGTTTTTGATGCTTTTCAGTCAGCAAAAGCTCGCG
GGATGGACATCCTGATAGCTGATACGGCCGGGCGCCTGCACACTCAGGGCAACCTGATGGAGGAATTGCGCAAGATTCGC
CGTGTCCTGCAGAAAATTGACCCGGCGGCACCGCATGAAACGATGCTGGTGCTTGATGCAGGCATTGGCCAGAATGCGGT
TAATCAGGCACGTGAATTTCATGAGGCGGTGGCGGTAAGTGGTATCACCATGACCAAACTCGATGGCACGGCGCGGGGCG
GCATACTTCTCGCCATCGCCGATACCCTGAAAATACCGCTTCGATTTGTGGGCATGGGTGAGGGGATTGACGATCTGCGT
CCCTTTGACGCGAACGCATACGTTCGCGCCATTCTCGGGCATGATGACGTTCCTGAACACGGGGAGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (46-110)

• SRP54-type protein, GTPase domain (SRP54) (132-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.333	87.719	0.485