Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | E4T54_RS06685 | Genome accession | NZ_CP038271 |
| Coordinates | 1519294..1519953 (+) | Length | 219 a.a. |
| NCBI ID | WP_028385651.1 | Uniprot ID | - |
| Organism | Legionella geestiana strain 1308 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1514294..1524953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4T54_RS06665 (E4T54_06665) | - | 1514946..1515170 (+) | 225 | WP_028385647.1 | hypothetical protein | - |
| E4T54_RS06670 (E4T54_06670) | - | 1515167..1518127 (+) | 2961 | WP_028385648.1 | hypothetical protein | - |
| E4T54_RS06675 (E4T54_06675) | dapB | 1518181..1518918 (-) | 738 | WP_028385649.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| E4T54_RS06680 (E4T54_06680) | - | 1518930..1519139 (-) | 210 | WP_028385650.1 | YqaE/Pmp3 family membrane protein | - |
| E4T54_RS06685 (E4T54_06685) | rocC | 1519294..1519953 (+) | 660 | WP_028385651.1 | ProQ/FinO family protein | Regulator |
| E4T54_RS06690 (E4T54_06690) | - | 1519976..1520314 (+) | 339 | WP_028385652.1 | hypothetical protein | - |
| E4T54_RS06695 (E4T54_06695) | - | 1520400..1521590 (-) | 1191 | WP_028385653.1 | phosphoglycerate kinase | - |
| E4T54_RS06700 (E4T54_06700) | gap | 1521587..1522594 (-) | 1008 | WP_028385654.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| E4T54_RS06705 (E4T54_06705) | tkt | 1522630..1524636 (-) | 2007 | WP_028385655.1 | transketolase | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 24098.63 Da Isoelectric Point: 10.9725
>NTDB_id=353042 E4T54_RS06685 WP_028385651.1 1519294..1519953(+) (rocC) [Legionella geestiana strain 1308]
MRRQELHPRTAVINRAQKLQSKKARVDALSWLAARFPEAFDNTSRIRPLKQGIMEDILATVADEAEAAGISKSKLREAVV
VFTRRVDYLTCLKAREMRIDLQGSPAGLVTEEEAERAAVKIRKRVEKSARNARRNNLVKMQAFNPSRAGSGMPVMADDSA
LPERAPAWSAPATPAARAPSVVVRHKSTRAFDPDAVARLKAKLGLSTRADAPEEEEAHG
MRRQELHPRTAVINRAQKLQSKKARVDALSWLAARFPEAFDNTSRIRPLKQGIMEDILATVADEAEAAGISKSKLREAVV
VFTRRVDYLTCLKAREMRIDLQGSPAGLVTEEEAERAAVKIRKRVEKSARNARRNNLVKMQAFNPSRAGSGMPVMADDSA
LPERAPAWSAPATPAARAPSVVVRHKSTRAFDPDAVARLKAKLGLSTRADAPEEEEAHG
Nucleotide
Download Length: 660 bp
>NTDB_id=353042 E4T54_RS06685 WP_028385651.1 1519294..1519953(+) (rocC) [Legionella geestiana strain 1308]
ATGAGAAGACAGGAGCTGCACCCGCGCACCGCCGTTATCAACAGAGCGCAGAAACTGCAATCCAAAAAAGCGCGGGTGGA
TGCCCTCTCCTGGCTTGCCGCGCGCTTTCCTGAGGCGTTTGACAATACCAGTCGTATCCGCCCGCTGAAGCAGGGAATTA
TGGAAGACATTCTCGCCACTGTTGCTGATGAGGCAGAGGCCGCTGGAATTTCCAAAAGCAAGTTACGCGAAGCCGTGGTA
GTTTTTACCCGGCGCGTTGATTATCTGACGTGTCTTAAGGCGCGGGAAATGCGCATTGATTTGCAGGGCAGCCCTGCAGG
CCTTGTTACGGAAGAAGAAGCTGAGCGCGCCGCCGTAAAGATTCGCAAGCGGGTTGAAAAAAGTGCGCGCAATGCCCGCC
GTAATAATCTTGTTAAAATGCAGGCTTTTAATCCTTCCCGCGCAGGTAGCGGCATGCCCGTCATGGCGGATGATTCTGCC
CTGCCTGAGCGCGCACCGGCATGGAGTGCGCCTGCAACTCCTGCTGCGCGCGCGCCATCGGTCGTTGTCCGCCATAAAAG
TACCCGGGCTTTTGACCCGGATGCCGTAGCACGCCTGAAAGCAAAACTCGGGCTGTCAACGCGAGCGGATGCACCGGAGG
AAGAAGAAGCACACGGGTAG
ATGAGAAGACAGGAGCTGCACCCGCGCACCGCCGTTATCAACAGAGCGCAGAAACTGCAATCCAAAAAAGCGCGGGTGGA
TGCCCTCTCCTGGCTTGCCGCGCGCTTTCCTGAGGCGTTTGACAATACCAGTCGTATCCGCCCGCTGAAGCAGGGAATTA
TGGAAGACATTCTCGCCACTGTTGCTGATGAGGCAGAGGCCGCTGGAATTTCCAAAAGCAAGTTACGCGAAGCCGTGGTA
GTTTTTACCCGGCGCGTTGATTATCTGACGTGTCTTAAGGCGCGGGAAATGCGCATTGATTTGCAGGGCAGCCCTGCAGG
CCTTGTTACGGAAGAAGAAGCTGAGCGCGCCGCCGTAAAGATTCGCAAGCGGGTTGAAAAAAGTGCGCGCAATGCCCGCC
GTAATAATCTTGTTAAAATGCAGGCTTTTAATCCTTCCCGCGCAGGTAGCGGCATGCCCGTCATGGCGGATGATTCTGCC
CTGCCTGAGCGCGCACCGGCATGGAGTGCGCCTGCAACTCCTGCTGCGCGCGCGCCATCGGTCGTTGTCCGCCATAAAAG
TACCCGGGCTTTTGACCCGGATGCCGTAGCACGCCTGAAAGCAAAACTCGGGCTGTCAACGCGAGCGGATGCACCGGAGG
AAGAAGAAGCACACGGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
58.261 |
100 |
0.612 |