Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GOM46_RS04350 Genome accession   NZ_CP046525
Coordinates   870187..870651 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus infantis strain SO     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 865187..875651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM46_RS04330 (GOM46_04320) - 865406..866398 (-) 993 WP_006150669.1 alpha-ketoacid dehydrogenase subunit beta -
  GOM46_RS04335 (GOM46_04325) - 866416..867384 (-) 969 WP_006150688.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  GOM46_RS04340 (GOM46_04330) - 867523..868863 (-) 1341 WP_235083278.1 MATE family efflux transporter -
  GOM46_RS04345 (GOM46_04335) - 868906..870174 (-) 1269 WP_006150730.1 dihydroorotase -
  GOM46_RS04350 (GOM46_04340) mutX 870187..870651 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  GOM46_RS04355 (GOM46_04345) - 870661..871314 (-) 654 WP_006150691.1 uracil-DNA glycosylase -
  GOM46_RS04360 (GOM46_04350) - 871326..872081 (-) 756 WP_025170021.1 DUF4336 domain-containing protein -
  GOM46_RS04365 (GOM46_04355) - 872211..872504 (-) 294 WP_025170020.1 hypothetical protein -
  GOM46_RS04370 (GOM46_04360) - 872528..873220 (-) 693 WP_006150715.1 YjjG family noncanonical pyrimidine nucleotidase -
  GOM46_RS04375 (GOM46_04365) - 873604..875499 (+) 1896 WP_235083279.1 Ig-like domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=352936 GOM46_RS04350 WP_001135768.1 870187..870651(-) (mutX) [Streptococcus infantis strain SO]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=352936 GOM46_RS04350 WP_001135768.1 870187..870651(-) (mutX) [Streptococcus infantis strain SO]
ATGCCTCAGTTAGCGACAATTTGCTACATTGATAACGGAAAAGAATTACTCATGCTCCATCGCAATAAAAAGCCTAATGA
TGTCCATGAAGGAAAATGGATCGGTGTAGGTGGAAAGTTAGAGCGCGGGGAAACTCCACAAGAATGTGCTGCCCGTGAGA
TTTTAGAAGAAACGGGTCTGAAAGCAAAACCAGTACTAAAGGGAGTTATTACCTTTCCTGAGTTTACACCAGACCTGGAC
TGGTACACATACGTTTTTAAGGTGACTGAGTTTGAGGGTGATTTGATTGACTGTAATGAAGGGACCTTAGAATGGGTTCC
TTACGATGAAGTTTTAAGCAAACCGACCTGGGAAGGGGACCATACCTTTGTCGAGTGGCTTTTAGAAGATAAACCCTTCT
TTTCAGCCAAGTTTGTCTATGATGGTGATAAGTTATTGGATACCCAAGTGGATTTCTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987