Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   GOM46_RS02185 Genome accession   NZ_CP046525
Coordinates   426234..428570 (+) Length   778 a.a.
NCBI ID   WP_235083857.1    Uniprot ID   -
Organism   Streptococcus infantis strain SO     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 421234..433570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM46_RS02160 (GOM46_02145) recD/recD2/recDB 421234..423600 (-) 2367 WP_235083855.1 ATP-dependent RecD-like DNA helicase Machinery gene
  GOM46_RS02165 (GOM46_02150) lepB 423691..424305 (-) 615 WP_025169989.1 signal peptidase I -
  GOM46_RS02170 (GOM46_02155) rnhC 424309..425190 (-) 882 WP_235083856.1 ribonuclease HIII -
  GOM46_RS02175 (GOM46_02160) zapA 425277..425579 (+) 303 WP_006150060.1 cell division protein ZapA -
  GOM46_RS02180 (GOM46_02165) - 425576..426124 (+) 549 WP_006150346.1 CvpA family protein -
  GOM46_RS02185 (GOM46_02170) mutS/mutS2 426234..428570 (+) 2337 WP_235083857.1 endonuclease MutS2 Machinery gene
  GOM46_RS02190 (GOM46_02175) - 428771..429667 (+) 897 WP_006150128.1 TDT family transporter -
  GOM46_RS02195 (GOM46_02180) - 429770..430603 (+) 834 WP_235083858.1 metallophosphoesterase family protein -
  GOM46_RS02200 (GOM46_02185) - 430667..431476 (-) 810 WP_235083859.1 amino acid ABC transporter substrate-binding protein -
  GOM46_RS02205 (GOM46_02190) - 431707..432312 (+) 606 WP_235083860.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87507.25 Da        Isoelectric Point: 6.8007

>NTDB_id=352913 GOM46_RS02185 WP_235083857.1 426234..428570(+) (mutS/mutS2) [Streptococcus infantis strain SO]
MNTKILETLEFNKVKALFEPHLLTEQGLEQLKELAPTDKGDKIKQAFAEMKEMQELFVEHPHFSISETKDIASTCKRLEM
GADLNIEEFLLLKRVIFASRELKNFYDNLENVRLDHLANWFEKLHDFPHLQGNLQAINEAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQLLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMMRILQELSERVRPHAAEIANDAWIIGRLDLIRTKVRFIQETGAVVPQVSEEQEIQLLHVRHPLVKNAVANDVHFGKD
LTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADNGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QNSLLLLDELGAGTDPQEGAALAMSILEDLRLRQVKTMATTHYPELKAYGIETAYVQNASMEFDTASLRPTYRFMQGVPG
RSNAFEIAKRLGLSDIIVGDASKQINQDNDVNRIIEQLEEQTLESHKRLENIRQVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVELALAESDDILKNLHSKSQLKPHEIIEAKAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIIVLSY
GQRGTLTNQLKDGRWEAQVGLIKMTLEEKEFDLVQAQKEAPVKKKQVNVVKRAAGKGPQARLDLRGKRYEEAMEALDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKQVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=352913 GOM46_RS02185 WP_235083857.1 426234..428570(+) (mutS/mutS2) [Streptococcus infantis strain SO]
ATGAATACAAAAATACTAGAAACGTTAGAATTTAACAAGGTCAAAGCTCTATTTGAACCCCATCTTTTGACGGAGCAGGG
ACTAGAGCAGTTAAAAGAACTTGCTCCAACGGATAAAGGTGACAAGATAAAACAGGCTTTCGCAGAGATGAAGGAGATGC
AGGAGCTTTTTGTGGAGCATCCTCATTTCAGCATTTCGGAAACAAAAGACATTGCTTCAACCTGCAAACGTTTGGAGATG
GGTGCTGACCTCAATATCGAGGAATTTCTCCTTCTCAAACGTGTCATATTTGCCAGTCGTGAATTGAAAAACTTCTATGA
CAATCTTGAAAATGTACGCTTGGATCACCTAGCAAATTGGTTTGAGAAACTTCATGATTTCCCACATCTGCAAGGAAACC
TTCAAGCCATCAACGAAGCTGGATTTATTGAGAATTTTGCGAGTGAAGAACTCGCACGAATCCGCCGGAAAATCCATGAT
AGTGAGAGCCAAGTTCGTGATGTCTTGCAAGACCTTCTCAAGCAGAAGGCGCAGCTGTTGACAGAAGGGATTGTCGCTAG
TAGAAATGGTCGTCAAGTTCTTCCAGTTAAAAATACCTATCGGAATAAGATTGCTGGGGTCGTTCACGATATTTCTGCCA
GTGGGAACACTGTTTATATCGAACCTCGTGAAGTAGTTAAGTTAAGTGAGGAAATTGCTAGTCTTCGTGCAGATGAACGC
TATGAGATGATGCGTATCCTTCAAGAACTCTCTGAACGAGTGAGACCGCATGCGGCTGAAATTGCCAATGATGCCTGGAT
TATTGGGCGTTTAGACTTGATTCGCACCAAGGTGCGTTTTATCCAAGAGACCGGAGCAGTGGTCCCTCAAGTATCTGAGG
AACAGGAAATCCAACTCCTCCATGTTCGCCATCCTTTGGTTAAGAATGCTGTCGCAAATGATGTGCACTTTGGGAAGGAT
TTGACAGCTATCGTCATCACCGGTCCTAATACGGGTGGTAAGACCATCATGCTAAAAACCTTAGGATTGACGCAAGTCAT
GGCCCAGTCTGGGCTGCCAATTCTAGCCGATAATGGCAGTCGTGTAGGGATTTTCGAGGAGATTTTTGCCGATATTGGAG
ATGAACAATCCATCGAGCAAAGTCTCTCAACCTTCTCTAGTCATATGACCAATATCGTTGATATTCTTGGTAAAGTCAAC
CAAAACTCGCTCTTGTTACTGGATGAGCTTGGAGCAGGAACGGATCCTCAGGAAGGTGCAGCCCTTGCCATGTCTATCTT
AGAAGACTTGCGTTTGCGTCAAGTCAAGACTATGGCAACCACTCACTATCCTGAGCTCAAGGCTTACGGGATTGAAACAG
CTTATGTTCAGAATGCCAGCATGGAGTTTGATACAGCTAGCCTGCGTCCAACTTATCGCTTTATGCAAGGCGTACCTGGT
CGAAGCAATGCATTTGAAATTGCCAAACGTCTAGGATTGTCGGATATCATTGTAGGTGACGCTAGCAAGCAGATTAACCA
AGACAATGATGTCAATCGCATCATTGAGCAATTGGAAGAACAAACACTTGAAAGTCACAAACGTCTTGAAAATATCCGCC
AAGTCGAGCAAGAGAACCTCAAGATGAATCGTGCACTTAAAAAACTCTACAATGAGCTTAACCGTGAAAAGGAAACAGAA
CTCAATAAGGCGCGTGAGCAAGCTGCTGAGATTGTTGAATTAGCTCTGGCAGAAAGTGATGATATTCTAAAAAATCTTCA
TAGCAAATCTCAACTAAAACCACATGAAATTATCGAAGCCAAGGCCAAGCTCAAGAAGTTAGCACCTGAAAAAGTTGACC
TTTCTAAAAACAAGGTCCTCCAAAAGGCCAAGAAAAAACGAGCTCCAAAAGTTGGAGATGATATTATCGTTTTAAGCTAT
GGTCAACGTGGTACCTTGACCAATCAACTAAAGGATGGACGTTGGGAAGCACAGGTTGGCTTGATTAAGATGACACTTGA
GGAAAAAGAGTTTGACTTGGTTCAAGCCCAGAAAGAAGCGCCAGTCAAGAAGAAACAAGTTAACGTCGTTAAACGTGCAG
CAGGAAAAGGTCCACAAGCTCGACTAGACCTTCGTGGCAAACGCTACGAGGAGGCTATGGAAGCCTTGGATGCCTTTATC
GACCAAGCCCTGCTCAACAATATGGCGCAAGTGGACATCATCCATGGTATCGGTACAGGAGTCATCCGTGAAGGGGTGAC
TAAGTACCTACAAAGAAATAAACAAGTCAAGAGCTTTGGCTATGCACCGCAAAATGCAGGTGGTTCTGGAGCGACTATCG
TTACCTTTAAAGGCTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-506)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.087

100

0.418