Detailed information NTG0352824

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: E4K02_RS12445
• Genome accession: NZ_CP038258
• Coordinates: 2533243..2533770 (-)
• Length: 175 a.a.
• NCBI ID: WP_004833663.1
• Uniprot ID: A0A0J8UZZ4
• Organism: Acinetobacter baumannii strain 39741
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2531609..2532828	2533243..2533770	flank	415

Gene organization within MGE regions

Location: 2531609..2533770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4K02_RS12440 (E4K02_12440)	-	2532881..2533180 (-)	300	Protein_2411	AMIN domain-containing protein	-
E4K02_RS12445 (E4K02_12445)	pilP	2533243..2533770 (-)	528	WP_004833663.1	pilus assembly protein PilP	Machinery gene

Sequence

Protein

• Length: 175 a.a.
• Molecular weight: 19465.70 Da
• Isoelectric Point: 8.9898

>NTDB_id=352824 E4K02_RS12445 WP_004833663.1 2533243..2533770(-) (pilP) [Acinetobacter baumannii strain 39741]
MKIKQITLYVLACTVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTLVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide

• Length: 528 bp

>NTDB_id=352824 E4K02_RS12445 WP_004833663.1 2533243..2533770(-) (pilP) [Acinetobacter baumannii strain 39741]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTACTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCTTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (27-170)

3D structure

• AlphaFold DB: A0A0J8UZZ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Acinetobacter baumannii D1279779	98.857	100	0.989
comL	Acinetobacter baylyi ADP1	71.264	99.429	0.709