Detailed information
Bioinformatically predicted
Overview
| Name | mutX | Type | Machinery gene |
| Locus tag | GOM47_RS04995 | Genome accession | NZ_CP046524 |
| Coordinates | 977546..978010 (+) | Length | 154 a.a. |
| NCBI ID | WP_235080007.1 | Uniprot ID | - |
| Organism | Streptococcus oralis strain SOT | ||
| Function | DNA mismatch repair (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 972546..983010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM47_RS04970 (GOM47_04970) | - | 973108..974022 (+) | 915 | WP_235080003.1 | C39 family peptidase | - |
| GOM47_RS04975 (GOM47_04975) | - | 974131..974673 (+) | 543 | WP_221160796.1 | ClbS/DfsB family four-helix bundle protein | - |
| GOM47_RS04980 (GOM47_04980) | - | 974958..975461 (+) | 504 | WP_235080004.1 | hypothetical protein | - |
| GOM47_RS09685 (GOM47_04985) | - | 975550..976095 (+) | 546 | Protein_935 | hypothetical protein | - |
| GOM47_RS04985 (GOM47_04990) | - | 976129..976821 (+) | 693 | WP_235080005.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| GOM47_RS04990 (GOM47_04995) | - | 976883..977536 (+) | 654 | WP_235080006.1 | uracil-DNA glycosylase | - |
| GOM47_RS04995 (GOM47_05000) | mutX | 977546..978010 (+) | 465 | WP_235080007.1 | NUDIX hydrolase | Machinery gene |
| GOM47_RS05000 (GOM47_05005) | - | 978023..979291 (+) | 1269 | WP_235080008.1 | dihydroorotase | - |
| GOM47_RS05005 (GOM47_05010) | - | 979338..980702 (+) | 1365 | WP_235080010.1 | MATE family efflux transporter | - |
| GOM47_RS05010 (GOM47_05015) | - | 980848..981816 (+) | 969 | WP_235080011.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| GOM47_RS05015 (GOM47_05020) | - | 981832..982824 (+) | 993 | WP_235080012.1 | alpha-ketoacid dehydrogenase subunit beta | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 17904.30 Da Isoelectric Point: 4.2885
>NTDB_id=352810 GOM47_RS04995 WP_235080007.1 977546..978010(+) (mutX) [Streptococcus oralis strain SOT]
MPQLATICYIDNGKELLMLHRNKKLNDVHEGKWIGVGGKLERGETPQECAAREIFEETGLKAKPVLKGIITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTRVDFYE
MPQLATICYIDNGKELLMLHRNKKLNDVHEGKWIGVGGKLERGETPQECAAREIFEETGLKAKPVLKGIITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTRVDFYE
Nucleotide
Download Length: 465 bp
>NTDB_id=352810 GOM47_RS04995 WP_235080007.1 977546..978010(+) (mutX) [Streptococcus oralis strain SOT]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTGCATCGTAATAAGAAGCTGAATGA
TGTCCATGAAGGCAAATGGATTGGTGTGGGTGGTAAGTTAGAGCGAGGGGAGACACCTCAGGAATGCGCAGCGCGTGAAA
TCTTCGAGGAAACGGGTTTGAAAGCTAAGCCAGTTCTAAAAGGCATTATCACTTTTCCAGAATTCACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTTGAAGGTGATTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAAGGTGATCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGACAAATTATTGGATACCCGAGTTGATTTTTATGAATAA
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTGCATCGTAATAAGAAGCTGAATGA
TGTCCATGAAGGCAAATGGATTGGTGTGGGTGGTAAGTTAGAGCGAGGGGAGACACCTCAGGAATGCGCAGCGCGTGAAA
TCTTCGAGGAAACGGGTTTGAAAGCTAAGCCAGTTCTAAAAGGCATTATCACTTTTCCAGAATTCACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTTGAAGGTGATTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAAGGTGATCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGACAAATTATTGGATACCCGAGTTGATTTTTATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| mutX | Streptococcus pneumoniae R6 |
96.104 |
100 |
0.961 |