Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   E3983_RS03625 Genome accession   NZ_CP038254
Coordinates   813506..816241 (-) Length   911 a.a.
NCBI ID   WP_135059906.1    Uniprot ID   A0AAX1EEI9
Organism   Legionella israelensis strain HL-0427-4011     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 808506..821241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3983_RS03595 (E3983_03595) - 809429..809860 (-) 432 WP_135059901.1 secondary thiamine-phosphate synthase enzyme YjbQ -
  E3983_RS03600 (E3983_03600) - 809853..810173 (-) 321 WP_342447553.1 BolA family protein -
  E3983_RS03605 (E3983_03605) - 810324..810851 (+) 528 WP_135059902.1 transposase -
  E3983_RS03610 (E3983_03610) - 810954..811406 (+) 453 WP_135059903.1 hypothetical protein -
  E3983_RS03615 (E3983_03615) pilA2 811647..812066 (+) 420 WP_209025857.1 pilin Machinery gene
  E3983_RS03620 (E3983_03620) - 812226..813476 (-) 1251 WP_135059905.1 6-phosphofructokinase -
  E3983_RS03625 (E3983_03625) letS 813506..816241 (-) 2736 WP_135059906.1 two-component system sensor histidine kinase LetS Regulator
  E3983_RS03630 (E3983_03630) - 816315..816545 (+) 231 WP_058502248.1 hypothetical protein -
  E3983_RS03635 (E3983_03635) gltX 816517..817929 (+) 1413 WP_135059907.1 glutamate--tRNA ligase -
  E3983_RS03640 (E3983_03640) - 817990..818478 (-) 489 WP_135059908.1 YchJ family metal-binding protein -
  E3983_RS03645 (E3983_03645) - 818602..819312 (+) 711 WP_135059909.1 glutathione S-transferase C-terminal domain-containing protein -

Sequence


Protein


Download         Length: 911 a.a.        Molecular weight: 103433.65 Da        Isoelectric Point: 7.7284

>NTDB_id=352762 E3983_RS03625 WP_135059906.1 813506..816241(-) (letS) [Legionella israelensis strain HL-0427-4011]
MKSLGIKYQLRITTLIPVLLVALLFALFYNGQFSKDLKQHMSRLGEAYIRQLMPAAQYALQQDNHRTLQGLINASTINQE
VKAVAFYDANGRLLAYRGGKHSLKKPFTPPAFTGDFIESKQLNSTTINFFAPITIPKYNLYSTDILRPSTQNFILQPDDI
LGWLSINIDTQSMLIKRYQMMIVTIFITLFGLLIGLATHYFLSKRIYMPISRLRRSMKQILRNEFETEIRVSSAGELGVI
EEGCAHLQKQYLDTIRDLNHHIEVATADLQQSLELLEEKNIELSMEKKKSEEKNRQKSEFIANMSHEIRTPMNGVIGFTN
VLLESKLDPLQLDYVKTIKTSAQDLLQIINDILDYSKMDAGKLHLDCIPLDIRACIDEVLVLSAPNAHKKGIDLIPITSL
EVPRTVLGDPLRIKQIISNLVNNAIKFTDKGYVLIRTEVEQEMANDYLLRISVSDTGIGISKEDQSKLFTAFNQADTSIT
RRYGGSGLGLVICKKLAEEMKGRISLSSDLHKGSTFSVHIRVEKLSSYEVEKNQNYRFAHLKVLCFDENRLQLESITNGL
GHWGIQCTTVNAFDKLAKALEHNKNCDFAFINVKQGYEAQIAELLKAHPNKTYILVSKWPIADVKSFGAQAFLYQPISIQ
KLHDIIESLMHQPSVPPSLVPQEVENLREQLRFSHPDILIAEDNPVNRMLLNSLLGENANMESVSDGEQAVVVCNEKRFQ
VILLDLQMPKLNGLEAAKKIRHESLLNRHTPILLLSASSTDINRDKLKNAGIDHCLHKPVEEKQLISHLLRLMDKAQHAA
IDWSLCVQKLSGNQKLAEDFLARFVEELKKDRLELIQLMRDKNIRGLASAAHKLHGACSFCGVPMLQKKVREFEIMTQQV
KNSEDLRSLFAELVQRIDAVIDEYENYYSES

Nucleotide


Download         Length: 2736 bp        

>NTDB_id=352762 E3983_RS03625 WP_135059906.1 813506..816241(-) (letS) [Legionella israelensis strain HL-0427-4011]
TTGAAAAGCCTTGGTATTAAATACCAGCTCAGGATTACAACACTTATTCCTGTGCTTCTCGTCGCTTTATTGTTTGCCTT
ATTTTATAACGGTCAATTCAGCAAAGATTTAAAACAACACATGTCGCGTCTCGGCGAAGCTTACATTCGCCAATTAATGC
CAGCTGCTCAGTATGCCTTACAGCAGGATAACCATCGGACTCTGCAAGGGCTCATTAACGCTTCTACCATCAATCAGGAA
GTGAAAGCCGTTGCTTTCTACGATGCCAATGGACGTCTGCTCGCTTATCGCGGAGGAAAACATTCTCTGAAAAAACCCTT
TACTCCTCCAGCCTTTACCGGTGATTTTATAGAAAGCAAGCAACTGAATTCCACCACCATTAATTTTTTCGCCCCCATCA
CTATCCCAAAATATAACTTATATTCCACGGATATACTGAGACCTTCAACCCAGAATTTTATTTTACAGCCAGATGATATT
TTGGGATGGCTGTCTATCAATATTGATACCCAATCCATGTTGATCAAGCGCTATCAAATGATGATTGTTACGATTTTTAT
TACGCTGTTTGGATTACTGATTGGCTTGGCCACGCATTATTTTTTGTCAAAACGCATTTATATGCCTATCAGCCGATTAC
GCAGGAGCATGAAACAGATTTTAAGGAATGAATTTGAGACAGAAATTCGCGTTTCAAGCGCAGGGGAGCTGGGTGTTATT
GAGGAGGGCTGTGCCCATTTGCAGAAACAATATCTCGACACCATACGTGATCTGAATCATCATATTGAAGTGGCCACGGC
TGACCTGCAACAAAGCCTTGAATTGCTGGAAGAAAAAAACATCGAATTATCGATGGAGAAGAAAAAATCAGAAGAAAAAA
ACCGGCAAAAATCAGAATTCATTGCCAACATGAGCCATGAAATCCGTACCCCTATGAATGGGGTGATTGGTTTTACTAAC
GTATTGCTGGAAAGTAAACTGGATCCCTTACAGCTCGATTATGTTAAAACGATCAAAACTTCTGCTCAGGATCTATTACA
AATCATCAACGACATTCTTGATTATTCAAAAATGGATGCCGGTAAACTCCATCTCGACTGTATACCTCTTGACATACGGG
CCTGCATTGATGAGGTTCTTGTTCTCTCTGCTCCCAATGCTCACAAAAAAGGCATTGACTTGATTCCAATTACCTCTCTC
GAGGTTCCAAGAACGGTTCTCGGTGATCCATTACGCATTAAACAAATCATATCCAATCTGGTGAACAATGCCATAAAATT
TACCGATAAAGGATACGTTCTTATCCGAACCGAGGTTGAGCAGGAGATGGCAAATGATTACCTGCTTCGCATCTCTGTAT
CCGATACCGGCATAGGGATTTCAAAAGAGGATCAGAGTAAATTATTTACAGCATTCAATCAGGCCGATACCAGCATTACC
CGTCGCTACGGCGGCTCCGGCCTTGGCCTTGTCATTTGCAAGAAACTGGCTGAAGAAATGAAAGGACGCATCAGCCTGAG
TAGCGATTTACATAAGGGTTCAACCTTCTCCGTTCATATTCGTGTGGAGAAACTCTCATCCTATGAAGTTGAAAAAAATC
AGAATTATCGTTTTGCTCATCTTAAAGTGTTATGCTTTGACGAAAACAGACTGCAACTGGAATCCATTACCAATGGCTTA
GGCCACTGGGGCATACAGTGCACTACTGTCAATGCCTTTGACAAATTAGCCAAAGCCTTAGAGCATAATAAAAACTGCGA
TTTCGCCTTTATTAACGTCAAACAAGGATATGAAGCGCAGATTGCCGAGCTTCTCAAAGCTCACCCGAATAAAACTTACA
TTCTTGTTTCAAAATGGCCAATTGCGGATGTCAAATCCTTCGGCGCACAAGCTTTTTTATACCAACCCATTAGCATCCAG
AAACTTCATGACATTATTGAATCCTTAATGCATCAACCATCAGTCCCCCCTTCACTTGTGCCTCAGGAAGTTGAAAATTT
GAGAGAACAACTGAGATTTTCTCATCCTGATATCCTGATAGCGGAAGATAATCCGGTCAACCGTATGTTGTTAAACTCCC
TGCTCGGTGAAAATGCAAATATGGAATCAGTAAGTGATGGTGAGCAAGCAGTCGTAGTCTGTAATGAAAAACGTTTCCAG
GTCATACTCCTCGATCTGCAAATGCCAAAGCTCAACGGACTCGAAGCTGCCAAAAAAATTCGACATGAATCTTTACTCAA
TCGTCATACGCCTATTCTTTTATTAAGCGCCAGCAGTACCGATATTAATCGCGATAAATTAAAAAACGCCGGTATTGATC
ATTGCCTGCATAAGCCTGTTGAGGAAAAACAACTCATCAGTCATTTACTTCGTTTGATGGACAAGGCTCAACACGCAGCC
ATCGACTGGTCCTTATGTGTGCAGAAACTGTCCGGTAACCAGAAGCTCGCTGAAGATTTTCTCGCCCGTTTTGTAGAAGA
ATTAAAAAAAGACAGGCTTGAATTGATTCAGTTGATGCGCGACAAAAACATTCGTGGTCTTGCCAGTGCCGCACACAAAT
TACATGGGGCCTGCAGTTTCTGTGGCGTTCCTATGTTGCAGAAAAAAGTAAGAGAATTTGAAATCATGACCCAGCAGGTC
AAAAATTCAGAAGATTTACGCTCACTTTTCGCTGAATTAGTCCAGCGTATTGACGCCGTTATTGATGAATATGAAAATTA
TTACAGCGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

71.099

99.89

0.71


Multiple sequence alignment