Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GOM48_RS05255 Genome accession   NZ_CP046523
Coordinates   1033216..1033680 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus oralis strain SOD     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1028216..1038680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM48_RS05235 (GOM48_05255) - 1028397..1029389 (-) 993 WP_008808674.1 alpha-ketoacid dehydrogenase subunit beta -
  GOM48_RS05240 (GOM48_05260) - 1029406..1030374 (-) 969 WP_000105373.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  GOM48_RS05245 (GOM48_05265) - 1030553..1031893 (-) 1341 WP_000283627.1 MATE family efflux transporter -
  GOM48_RS05250 (GOM48_05270) - 1031935..1033203 (-) 1269 WP_000924511.1 dihydroorotase -
  GOM48_RS05255 (GOM48_05275) mutX 1033216..1033680 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  GOM48_RS05260 (GOM48_05280) - 1033690..1034343 (-) 654 WP_001164853.1 uracil-DNA glycosylase -
  GOM48_RS05265 (GOM48_05285) - 1034405..1035097 (-) 693 WP_001146400.1 YjjG family noncanonical pyrimidine nucleotidase -
  GOM48_RS05270 (GOM48_05290) - 1035229..1036323 (-) 1095 WP_001055022.1 AI-2E family transporter -
  GOM48_RS05275 (GOM48_05295) - 1036333..1037622 (-) 1290 WP_000411457.1 hypothetical protein -
  GOM48_RS05280 (GOM48_05300) - 1037963..1038379 (-) 417 WP_235096341.1 immunity 70 family protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=352705 GOM48_RS05255 WP_001135768.1 1033216..1033680(-) (mutX) [Streptococcus oralis strain SOD]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=352705 GOM48_RS05255 WP_001135768.1 1033216..1033680(-) (mutX) [Streptococcus oralis strain SOD]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTCCATCGCAATAAGAAGCCCAACGA
TGTCCATGAAGGCAAATGGATTGGTGTGGGTGGAAAGCTAGAGCGAGGTGAGACTCCACAGGAATGTGCAGCGCGTGAAA
TCCTCGAAGAAACAGGGCTCAAAGCCAAGCCAGTACTTAAAGGTGTTATCACTTTTCCTGAATTTACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTCGAGGGTGACTTGATTGACTGCAATGAGGGGACCTTAGAATGGGTTCC
CTATGATGAAGTCTTAAGCAAGCCAACTTGGGAGGGTGATCACACCTTTGTTGAGTGGCTTTTAGAAGATAAACCTTTCT
TTTCAGCAAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987