Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ES300_RS10590 Genome accession   NZ_CP038251
Coordinates   2070684..2071442 (+) Length   252 a.a.
NCBI ID   WP_000410380.1    Uniprot ID   A0A6G2D2R9
Organism   Streptococcus pneumoniae strain TVO_1901944     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2065684..2076442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES300_RS10560 (ES300_11075) comE 2066280..2067032 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ES300_RS10565 (ES300_11080) comD/comD1 2067029..2068354 (-) 1326 WP_001853914.1 competence system sensor histidine kinase ComD Regulator
  ES300_RS10570 (ES300_11085) comC/comC1 2068375..2068500 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  ES300_RS10580 (ES300_11095) rlmH 2068783..2069262 (-) 480 WP_000695930.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ES300_RS10585 (ES300_11100) htrA 2069445..2070626 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  ES300_RS10590 (ES300_11105) spo0J 2070684..2071442 (+) 759 WP_000410380.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29179.54 Da        Isoelectric Point: 9.0305

>NTDB_id=352592 ES300_RS10590 WP_000410380.1 2070684..2071442(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901944]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNYFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=352592 ES300_RS10590 WP_000410380.1 2070684..2071442(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901944]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATTATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G2D2R9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment