Detailed information    

insolico Bioinformatically predicted

Overview


Name   yaaT   Type   Regulator
Locus tag   GE024_RS02335 Genome accession   NZ_CP046521
Coordinates   434536..435336 (+) Length   266 a.a.
NCBI ID   WP_093998440.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_100     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context


Location: 429536..440336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS02300 (GE024_02295) upp 429808..430437 (+) 630 WP_003046872.1 uracil phosphoribosyltransferase -
  GE024_RS02305 (GE024_02300) clpP 430658..431248 (+) 591 WP_093998442.1 ATP-dependent Clp protease proteolytic subunit Regulator
  GE024_RS02310 (GE024_02305) - 431537..431983 (+) 447 WP_039994942.1 YlbF family regulator -
  GE024_RS02315 (GE024_02310) - 431983..432270 (+) 288 WP_003046884.1 YlbG family protein -
  GE024_RS11100 - 432522..432662 (+) 141 WP_232038563.1 hypothetical protein -
  GE024_RS02325 (GE024_02320) tmk 433016..433651 (+) 636 WP_093998441.1 dTMP kinase -
  GE024_RS02330 (GE024_02325) - 433667..434539 (+) 873 WP_003046898.1 DNA polymerase III subunit delta' -
  GE024_RS02335 (GE024_02330) yaaT 434536..435336 (+) 801 WP_093998440.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  GE024_RS02340 (GE024_02335) yabA 435329..435652 (+) 324 WP_003046904.1 DNA replication initiation control protein YabA -
  GE024_RS02345 (GE024_02340) rsmI 435657..436520 (+) 864 WP_003046907.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GE024_RS02350 (GE024_02345) - 436548..436943 (+) 396 WP_093998439.1 DUF5684 domain-containing protein -
  GE024_RS02355 (GE024_02350) - 436989..437618 (-) 630 WP_093998438.1 copper homeostasis protein CutC -
  GE024_RS02360 (GE024_02355) - 437966..438517 (+) 552 WP_003046916.1 GNAT family N-acetyltransferase -
  GE024_RS02365 (GE024_02360) - 438586..439083 (+) 498 WP_093998481.1 methylated-DNA--[protein]-cysteine S-methyltransferase -
  GE024_RS02370 (GE024_02365) - 439080..439436 (+) 357 WP_003046924.1 arsenate reductase family protein -
  GE024_RS02375 (GE024_02370) - 439490..439912 (-) 423 WP_003046926.1 VOC family protein -
  GE024_RS02380 (GE024_02375) - 439914..440303 (-) 390 WP_003046928.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 29421.04 Da        Isoelectric Point: 7.0273

>NTDB_id=352572 GE024_RS02335 WP_093998440.1 434536..435336(+) (yaaT) [Streptococcus canis strain HL_100]
MISAIGIRYGESELVKYALTEQDFPVETLVVVKDGKGSHLAKVCQVKKAFSETSLPKGLPTVVRSATLMDTKAFEDNARF
AAASKAEVVALIAKNGLDMKLIDIVFPLERNYVLITFSAEERVDFRQLLKDLAAYFKTRIELHQINSREEAKIYGGLGPC
GRPLCCSSFLGEFPTVSIKMLKNQGLSLNSGKSTGYCGRLLCCLQYEDSFYQENKKKFPDYGTIVETSDGPATVAAIDIF
TDTIKVRLKDQLTLVTYALEEVKVGE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=352572 GE024_RS02335 WP_093998440.1 434536..435336(+) (yaaT) [Streptococcus canis strain HL_100]
ATGATAAGCGCAATTGGGATTCGTTATGGGGAATCGGAACTTGTCAAATATGCTTTGACAGAGCAGGATTTTCCCGTGGA
AACTTTAGTAGTGGTCAAAGATGGCAAAGGGAGCCATCTAGCAAAAGTTTGTCAAGTGAAAAAGGCCTTTTCAGAGACTA
GTCTTCCCAAGGGATTACCAACTGTTGTAAGATCTGCTACGCTTATGGATACAAAGGCATTTGAGGACAATGCTAGGTTT
GCAGCAGCGTCAAAGGCAGAAGTAGTGGCTTTGATTGCCAAAAATGGGTTGGACATGAAACTTATCGATATTGTCTTTCC
TTTGGAGCGCAATTATGTCTTGATTACCTTTTCAGCTGAAGAACGCGTTGATTTTCGGCAACTGTTAAAAGATTTAGCAG
CTTATTTTAAGACCAGGATTGAATTGCATCAAATTAATAGTCGTGAGGAAGCTAAGATTTACGGTGGCTTAGGACCGTGT
GGTCGTCCGCTTTGTTGTTCGAGTTTTTTGGGAGAATTTCCAACAGTTTCTATTAAAATGTTGAAAAATCAAGGGCTCTC
TCTCAATTCTGGCAAATCAACAGGCTACTGTGGTCGTCTCTTATGTTGTCTCCAATATGAGGATAGCTTTTATCAGGAAA
ACAAGAAAAAATTTCCTGATTATGGTACCATAGTAGAGACAAGTGATGGTCCTGCAACAGTAGCAGCCATTGACATTTTT
ACGGACACTATTAAGGTGCGGTTGAAAGACCAGTTGACCTTGGTAACTTACGCTTTAGAGGAGGTTAAAGTAGGTGAATA
A

Domains


Predicted by InterProScan.

(61-145)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.667

99.248

0.414


Multiple sequence alignment