Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GOL67_RS06280 Genome accession   NZ_CP046476
Coordinates   1305536..1306159 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain MEI001     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1300536..1311159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOL67_RS06260 (GOL67_06295) rpmG 1302112..1302261 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  GOL67_RS06265 (GOL67_06300) rpsN 1302715..1302984 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  GOL67_RS06270 (GOL67_06305) guaC 1303141..1304118 (+) 978 WP_000688122.1 GMP reductase -
  GOL67_RS06275 (GOL67_06315) - 1304140..1305156 (+) 1017 WP_170957313.1 CAP domain-containing protein -
  GOL67_RS06280 (GOL67_06320) dinR/lexA 1305536..1306159 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  GOL67_RS06285 (GOL67_06325) sosA 1306302..1306535 (+) 234 WP_000499658.1 DNA damage-induced cell division inhibitor SosA -
  GOL67_RS06290 (GOL67_06330) - 1306671..1306910 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  GOL67_RS06295 (GOL67_06335) recP/tkt 1307031..1309019 (+) 1989 WP_000481451.1 transketolase Machinery gene
  GOL67_RS06300 (GOL67_06340) - 1309297..1309539 (+) 243 WP_000246909.1 YneF family protein -
  GOL67_RS06305 (GOL67_06345) - 1309526..1309624 (+) 99 WP_001789897.1 hypothetical protein -
  GOL67_RS06310 (GOL67_06350) - 1309718..1310185 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=352496 GOL67_RS06280 WP_001208755.1 1305536..1306159(-) (dinR/lexA) [Staphylococcus aureus strain MEI001]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=352496 GOL67_RS06280 WP_001208755.1 1305536..1306159(-) (dinR/lexA) [Staphylococcus aureus strain MEI001]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment