Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E3Z29_RS00240 Genome accession   NZ_CP038207
Coordinates   50410..50814 (-) Length   134 a.a.
NCBI ID   WP_003229093.1    Uniprot ID   -
Organism   Pseudomonas sp. S150     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 45410..55814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3Z29_RS00225 (E3Z29_00225) - 47178..49234 (-) 2057 Protein_41 methyl-accepting chemotaxis protein -
  E3Z29_RS00230 (E3Z29_00230) - 49435..49974 (-) 540 WP_007964098.1 chemotaxis protein CheW -
  E3Z29_RS00235 (E3Z29_00235) pilH 49985..50350 (-) 366 WP_025109154.1 twitching motility response regulator PilH -
  E3Z29_RS00240 (E3Z29_00240) pilG 50410..50814 (-) 405 WP_003229093.1 twitching motility response regulator PilG Regulator
  E3Z29_RS00245 (E3Z29_00245) gshB 51040..52011 (+) 972 WP_095137531.1 glutathione synthase -
  E3Z29_RS00250 (E3Z29_00250) - 52119..53018 (+) 900 WP_007964106.1 energy transducer TonB -
  E3Z29_RS00255 (E3Z29_00255) - 53254..53826 (+) 573 WP_097088974.1 YqgE/AlgH family protein -
  E3Z29_RS00260 (E3Z29_00260) ruvX 53826..54263 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  E3Z29_RS00265 (E3Z29_00265) pyrR 54345..54851 (+) 507 WP_027610583.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14617.02 Da        Isoelectric Point: 6.7107

>NTDB_id=352288 E3Z29_RS00240 WP_003229093.1 50410..50814(-) (pilG) [Pseudomonas sp. S150]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=352288 E3Z29_RS00240 WP_003229093.1 50410..50814(-) (pilG) [Pseudomonas sp. S150]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAAAATGTGGGCTGCGAAGTCATCACGGCGATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACCACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTTGACGCGATTCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment