Detailed information NTG0352228

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GJV83_RS00855
• Genome accession: NZ_CP046416
• Coordinates: 177664..178647 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain LZYWN_4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 172664..183647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV83_RS00840 (GJV83_00840)	dppA	173807..175414 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
GJV83_RS24185	-	175448..175558 (-)	111	Protein_168	hypothetical protein	-
GJV83_RS00845 (GJV83_00845)	dppB	175722..176741 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GJV83_RS00850 (GJV83_00850)	dppC	176751..177653 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GJV83_RS00855 (GJV83_00855)	amiE	177664..178647 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GJV83_RS00860 (GJV83_00860)	dppF	178644..179648 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GJV83_RS00865 (GJV83_00865)	yhjV	179678..180949 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GJV83_RS00870 (GJV83_00870)	ldrD	181425..181532 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
GJV83_RS00875 (GJV83_00875)	bcsG	181619..183298 (-)	1680	Protein_175	cellulose biosynthesis protein BcsG	-
GJV83_RS00880 (GJV83_00880)	bcsF	183295..183486 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=352228 GJV83_RS00855 WP_001196486.1 177664..178647(+) (amiE) [Escherichia coli strain LZYWN_4]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=352228 GJV83_RS00855 WP_001196486.1 177664..178647(+) (amiE) [Escherichia coli strain LZYWN_4]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404