Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EYQ98_RS08870 Genome accession   NZ_CP038186
Coordinates   1742332..1742793 (-) Length   153 a.a.
NCBI ID   WP_134778762.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MCC 2514     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1737332..1747793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYQ98_RS08850 (EYQ98_08850) - 1737678..1738847 (-) 1170 WP_003181276.1 aminotransferase A -
  EYQ98_RS22030 - 1739039..1739194 (-) 156 WP_011197938.1 hypothetical protein -
  EYQ98_RS08855 (EYQ98_08855) - 1739369..1739893 (+) 525 WP_003181280.1 RDD family protein -
  EYQ98_RS08860 (EYQ98_08860) - 1739990..1741309 (+) 1320 WP_003181282.1 MFS transporter -
  EYQ98_RS08865 (EYQ98_08865) - 1741383..1742300 (+) 918 WP_003181284.1 chemotaxis protein -
  EYQ98_RS08870 (EYQ98_08870) kre 1742332..1742793 (-) 462 WP_134778762.1 YkyB family protein Regulator
  EYQ98_RS08875 (EYQ98_08875) - 1742935..1744236 (-) 1302 WP_003181287.1 MFS transporter -
  EYQ98_RS08880 (EYQ98_08880) - 1744325..1744822 (-) 498 WP_003181289.1 L,D-transpeptidase family protein -
  EYQ98_RS08890 (EYQ98_08890) - 1745002..1745859 (-) 858 WP_003181293.1 metallophosphoesterase -
  EYQ98_RS08895 (EYQ98_08895) fadH 1746005..1746769 (+) 765 WP_003181295.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17585.38 Da        Isoelectric Point: 10.6340

>NTDB_id=352224 EYQ98_RS08870 WP_134778762.1 1742332..1742793(-) (kre) [Bacillus licheniformis strain MCC 2514]
MDDHNHTIELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=352224 EYQ98_RS08870 WP_134778762.1 1742332..1742793(-) (kre) [Bacillus licheniformis strain MCC 2514]
ATGGACGACCATAATCATACGATAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAACCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAAG
GTAAAAAGGTAGGCCTGCATTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATATCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATCAAAGAAAAACCGCTCGTCA
CAAACCGGAAGCGTCCAGCCTCAAAACCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

81.818

100

0.824

Multiple sequence alignment