Detailed information NTG0351726

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: GNT46_RS00135
• Genome accession: NZ_CP046403
• Coordinates: 30899..31924 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain SE5369
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 25899..36924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNT46_RS00110 (GNT46_00110)	-	26088..26405 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
GNT46_RS00115 (GNT46_00115)	trkA	26554..27927 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
GNT46_RS00120 (GNT46_00120)	rsmB	27954..29258 (-)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
GNT46_RS00125 (GNT46_00125)	fmt	29255..30199 (-)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
GNT46_RS00130 (GNT46_00130)	def	30254..30760 (-)	507	WP_003107059.1	peptide deformylase	-
GNT46_RS00135 (GNT46_00135)	tsaP	30899..31924 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
GNT46_RS00140 (GNT46_00140)	dprA	32059..33147 (+)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
GNT46_RS00145 (GNT46_00145)	-	33188..33745 (+)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
GNT46_RS00150 (GNT46_00150)	-	33755..34732 (-)	978	WP_023083579.1	NADPH:quinone reductase	-
GNT46_RS00155 (GNT46_00155)	hemF	34923..35840 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
GNT46_RS00160 (GNT46_00160)	aroE	35898..36722 (+)	825	WP_023083578.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=351726 GNT46_RS00135 WP_003097294.1 30899..31924(+) (tsaP) [Pseudomonas aeruginosa strain SE5369]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=351726 GNT46_RS00135 WP_003097294.1 30899..31924(+) (tsaP) [Pseudomonas aeruginosa strain SE5369]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393