Detailed information NTG0351669

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E2544_RS04660
• Genome accession: NZ_CP038034
• Coordinates: 1026647..1027681 (+)
• Length: 344 a.a.
• NCBI ID: WP_408609561.1
• Uniprot ID: -
• Organism: Achromobacter insolitus strain LCu2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1021647..1032681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E2544_RS04635 (E2544_04640)	-	1023133..1023519 (+)	387	WP_149063751.1	MOSC N-terminal beta barrel domain-containing protein	-
E2544_RS04640 (E2544_04645)	-	1023549..1024772 (-)	1224	WP_187639852.1	benzoate/H(+) symporter BenE family transporter	-
E2544_RS04645 (E2544_04650)	-	1024769..1025020 (-)	252	WP_042795127.1	YfhL family 4Fe-4S dicluster ferredoxin	-
E2544_RS04650 (E2544_04655)	coaD	1025145..1025648 (-)	504	WP_013396175.1	pantetheine-phosphate adenylyltransferase	-
E2544_RS04655 (E2544_04660)	rsmD	1025707..1026273 (-)	567	WP_042795126.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E2544_RS04660 (E2544_04665)	pilA	1026647..1027681 (+)	1035	WP_408609561.1	signal recognition particle-docking protein FtsY	Machinery gene
E2544_RS04665 (E2544_04670)	-	1027766..1029424 (-)	1659	WP_063642819.1	CYTH and CHAD domain-containing protein	-
E2544_RS04670 (E2544_04675)	-	1029798..1030202 (+)	405	WP_187639854.1	autotransporter-associated beta strand repeat-containing protein	-
E2544_RS04675 (E2544_04680)	phnE	1030218..1031042 (-)	825	WP_042795123.1	phosphonate ABC transporter, permease protein PhnE	-
E2544_RS04680 (E2544_04685)	phnE	1031039..1031923 (-)	885	WP_149063755.1	phosphonate ABC transporter, permease protein PhnE	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 35713.20 Da
• Isoelectric Point: 8.5379

>NTDB_id=351669 E2544_RS04660 WP_408609561.1 1026647..1027681(+) (pilA) [Achromobacter insolitus strain LCu2]
MAPVPAPATAPAPALAPNPAPAAPSAVAPAPIVEAAAEAPKKASWLSRLKQGLSRTGQSIGGIFVGVKVDENLFEELESA
LIMADAGLEATEKLLTALRARVKKERIEDPAKVKAALRQLLADHLRPLERAFDLKRTQPLVVMIAGVNGAGKTTSIGKLA
HTFQRQGASVLLAAGDTFRAAAREQLIEWGSRNNVTVISQDGGDPAAVAFDAVNAGRARGMGVVMVDTAGRLPTQLHLME
ELKKIRRVIGKADAAAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWI
GVGESLEDLQPFVADEFAGALLAD

Nucleotide

• Length: 1035 bp

>NTDB_id=351669 E2544_RS04660 WP_408609561.1 1026647..1027681(+) (pilA) [Achromobacter insolitus strain LCu2]
GTGGCGCCGGTGCCTGCACCGGCGACTGCCCCGGCACCGGCTTTGGCGCCGAATCCCGCGCCGGCAGCGCCTTCGGCGGT
TGCCCCCGCGCCCATTGTCGAAGCCGCCGCGGAAGCGCCCAAGAAGGCATCGTGGCTGTCCCGCCTGAAACAGGGGCTGT
CGCGCACGGGTCAGAGCATTGGCGGTATTTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTCGAGTCGGCG
CTCATTATGGCCGATGCGGGCCTGGAGGCTACCGAAAAGCTCCTGACCGCGCTGCGCGCCCGCGTGAAAAAAGAGCGCAT
CGAGGACCCGGCCAAGGTGAAGGCGGCGCTGCGCCAGTTGCTGGCCGACCACCTGCGTCCGCTGGAGCGCGCATTCGATT
TGAAGCGCACGCAGCCGCTGGTCGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACCACGTCGATCGGCAAGCTGGCC
CATACCTTTCAGCGCCAGGGCGCCAGCGTGCTGTTGGCTGCGGGCGATACTTTCCGCGCTGCGGCGCGCGAGCAGCTTAT
CGAATGGGGCAGCCGCAACAACGTGACGGTGATCTCGCAGGACGGCGGCGATCCCGCAGCCGTAGCGTTCGATGCCGTCA
ATGCCGGCCGCGCGCGCGGCATGGGCGTGGTGATGGTCGACACCGCTGGCCGCCTGCCCACCCAACTGCACCTGATGGAA
GAACTCAAGAAGATCCGCCGCGTCATCGGCAAGGCGGATGCCGCGGCGCCGCACGAGGTGCTGCTTGTGGTGGACGGCAA
TACCGGCCAGAACGCCTTGGCGCAGATTCGCGCCTTTGACGCCGCGATCAATCTGACGGGCCTGGTCGTGACCAAGCTGG
ACGGCACCGCCAAGGGGGGCACGCTGGCTGCCGTGGCCGCGGGCAGCCAGGGCGTGCGCCCGATTCCGGTGTACTGGATC
GGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCCTTTGTGGCTGACGAATTCGCCGGGGCCTTGCTGGCGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (140-342)

• SRP54-type protein, helical bundle domain (SRP54_N) (58-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.497	88.953	0.52