Detailed information NTG0035161

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CAP2UW1_RS19935
• Genome accession: NC_013194
• Coordinates: 4580613..4581602 (+)
• Length: 329 a.a.
• NCBI ID: WP_015768423.1
• Uniprot ID: A0A9D8KQ93
• Organism: Candidatus Accumulibacter phosphatis
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4575613..4586602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAP2UW1_RS19905	-	4575875..4576429 (+)	555	WP_049778618.1	M23 family metallopeptidase	-
CAP2UW1_RS19910 (CAP2UW1_4008)	-	4576517..4576777 (-)	261	WP_015768418.1	YfhL family 4Fe-4S dicluster ferredoxin	-
CAP2UW1_RS19915 (CAP2UW1_4009)	coaD	4576791..4577294 (-)	504	WP_015768419.1	pantetheine-phosphate adenylyltransferase	-
CAP2UW1_RS19920 (CAP2UW1_4010)	rsmD	4577281..4577835 (-)	555	WP_041567941.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CAP2UW1_RS19925 (CAP2UW1_4011)	-	4577840..4579135 (-)	1296	WP_015768421.1	M16 family metallopeptidase	-
CAP2UW1_RS19930 (CAP2UW1_4012)	-	4579150..4580517 (-)	1368	WP_199931520.1	M16 family metallopeptidase	-
CAP2UW1_RS19935 (CAP2UW1_4013)	pilA	4580613..4581602 (+)	990	WP_015768423.1	signal recognition particle-docking protein FtsY	Machinery gene
CAP2UW1_RS19940 (CAP2UW1_4014)	-	4581599..4582288 (+)	690	WP_015768424.1	cell division ATP-binding protein FtsE	-
CAP2UW1_RS19945 (CAP2UW1_4015)	ftsX	4582285..4583184 (+)	900	WP_015768425.1	permease-like cell division protein FtsX	-
CAP2UW1_RS19950 (CAP2UW1_4016)	-	4583246..4583620 (-)	375	WP_015768426.1	diacylglycerol kinase	-
CAP2UW1_RS19955 (CAP2UW1_4017)	rpiA	4583767..4584429 (+)	663	WP_015768427.1	ribose-5-phosphate isomerase RpiA	-
CAP2UW1_RS19960 (CAP2UW1_4018)	-	4584453..4584725 (-)	273	WP_015768428.1	oxidative damage protection protein	-
CAP2UW1_RS19965 (CAP2UW1_4019)	argA	4584820..4586139 (-)	1320	WP_015768429.1	amino-acid N-acetyltransferase	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 35544.91 Da
• Isoelectric Point: 7.5202

>NTDB_id=35161 CAP2UW1_RS19935 WP_015768423.1 4580613..4581602(+) (pilA) [Candidatus Accumulibacter phosphatis]
MFGFLKKSPVQAPTADPTIAEPTEAPTASSWRQRLKSGLARTRAQFGGKLKSLFSRGKVDDELLEELEALLLTSDVGLDA
TQHLLYQLKMRAKRDKLETPEAIQHALSEALYELLRPLEEALDLSSHRPFIIMIAGVNGAGKTTSIGKLAKHFQAHGLSV
LLAAGDTFRAAAREQLQTWGERNNVTVIAQQSGDPAAVIFDAIAAAKARGIDVVLADTAGRLPTQLHLMDEIAKVRRVIQ
KADPTAPHETLLVLDATFGQNTLQQVMAFDKAIQVSGLVLTKLDGTAKGGVVAAIARQCPKPVRFIGVGEGIDDLRPFSA
RDFVDALFE

Nucleotide

• Length: 990 bp

>NTDB_id=35161 CAP2UW1_RS19935 WP_015768423.1 4580613..4581602(+) (pilA) [Candidatus Accumulibacter phosphatis]
ATGTTTGGTTTCCTCAAGAAATCCCCTGTTCAAGCTCCCACGGCCGACCCAACCATTGCCGAACCCACAGAGGCGCCGAC
TGCCAGCTCGTGGCGACAACGTCTCAAGTCCGGCCTGGCACGCACGCGCGCCCAATTTGGCGGCAAGCTGAAGTCGCTTT
TCTCGCGCGGCAAAGTCGACGACGAACTGCTCGAAGAGCTGGAAGCCCTGCTGCTGACCAGCGACGTCGGCCTCGACGCA
ACCCAGCACCTGCTCTATCAACTCAAGATGCGTGCCAAACGCGACAAGCTCGAAACGCCGGAGGCCATTCAGCACGCGTT
GTCGGAAGCCCTGTACGAACTCCTGCGACCGCTCGAGGAGGCCCTCGACCTTTCCTCGCACCGGCCTTTCATCATCATGA
TTGCTGGCGTCAACGGCGCCGGCAAGACGACCTCGATCGGCAAGTTGGCCAAGCACTTTCAGGCTCATGGCCTGTCCGTC
CTGCTGGCCGCCGGCGATACCTTCCGAGCGGCGGCGCGCGAGCAGCTGCAGACCTGGGGCGAACGCAACAACGTAACGGT
CATTGCGCAGCAATCCGGCGATCCGGCGGCGGTGATCTTTGACGCCATCGCGGCGGCCAAAGCACGCGGCATCGACGTCG
TACTGGCCGATACCGCCGGCCGCCTGCCGACGCAGTTGCATCTGATGGACGAGATTGCCAAGGTGCGGCGGGTCATCCAG
AAGGCCGACCCCACCGCTCCGCACGAGACGCTGCTGGTCCTCGACGCGACCTTCGGCCAAAACACCTTGCAGCAGGTGAT
GGCCTTCGACAAGGCGATCCAGGTCAGCGGCCTGGTGCTGACCAAGCTCGACGGCACGGCCAAGGGCGGCGTCGTCGCCG
CCATCGCTCGCCAGTGCCCGAAACCCGTCCGCTTCATCGGCGTCGGCGAAGGCATCGACGATCTGCGACCGTTCAGTGCC
CGCGATTTTGTCGACGCGCTCTTCGAGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (129-328)

• SRP54-type protein, helical bundle domain (SRP54_N) (46-111)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	62.667	91.185	0.571