Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   E3C75_RS10850 Genome accession   NZ_CP038020
Coordinates   2072303..2073379 (-) Length   358 a.a.
NCBI ID   WP_171815041.1    Uniprot ID   A0A0E2QFS3
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2067303..2078379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS10830 - 2068413..2070479 (-) 2067 WP_084829062.1 sodium:proton antiporter -
  E3C75_RS10835 - 2070488..2070730 (-) 243 WP_011226461.1 hypothetical protein -
  E3C75_RS10840 - 2070727..2071275 (-) 549 WP_084829063.1 class I SAM-dependent methyltransferase -
  E3C75_RS10845 - 2071268..2072218 (-) 951 WP_111679688.1 TIGR01212 family radical SAM protein -
  E3C75_RS10850 sepM 2072303..2073379 (-) 1077 WP_171815041.1 SepM family pheromone-processing serine protease Regulator
  E3C75_RS10855 coaD 2073357..2073854 (-) 498 WP_095559436.1 pantetheine-phosphate adenylyltransferase -
  E3C75_RS10860 rsmD 2073888..2074427 (-) 540 WP_339327201.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  E3C75_RS10865 trxB 2074578..2075498 (-) 921 WP_084829067.1 thioredoxin-disulfide reductase -
  E3C75_RS10870 - 2075564..2075788 (-) 225 WP_084829068.1 DUF4059 family protein -
  E3C75_RS10875 - 2076003..2076746 (-) 744 WP_084829069.1 amino acid ABC transporter ATP-binding protein -
  E3C75_RS10880 - 2076746..2077492 (-) 747 WP_100262472.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 358 a.a.        Molecular weight: 39156.06 Da        Isoelectric Point: 9.6075

>NTDB_id=351435 E3C75_RS10850 WP_171815041.1 2072303..2073379(-) (sepM) [Streptococcus thermophilus strain ATCC 19258]
MANKTKSKSLLEKMWRIKWRLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDFLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=351435 E3C75_RS10850 WP_171815041.1 2072303..2073379(-) (sepM) [Streptococcus thermophilus strain ATCC 19258]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGCGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTTTTTGAAAAAGACTAAATGA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(137-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2QFS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.463

95.251

0.595

Multiple sequence alignment