Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EZJ17_RS02665 Genome accession   NZ_CP038018
Coordinates   506830..507291 (-) Length   153 a.a.
NCBI ID   WP_067442600.1    Uniprot ID   A0AAX1F6E5
Organism   Eikenella exigua strain PXX     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 501830..512291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EZJ17_RS02655 (EZJ17_02640) - 502911..503198 (-) 288 WP_067442604.1 putative quinol monooxygenase -
  EZJ17_RS02660 (EZJ17_02645) gcvP 503485..506337 (-) 2853 WP_067442602.1 aminomethyl-transferring glycine dehydrogenase -
  EZJ17_RS02665 (EZJ17_02650) recX 506830..507291 (-) 462 WP_067442600.1 recombination regulator RecX Regulator
  EZJ17_RS02670 (EZJ17_02655) - 507278..507976 (-) 699 WP_067442598.1 phosphoglycolate phosphatase -
  EZJ17_RS02675 (EZJ17_02660) hscB 508178..508678 (-) 501 WP_067442596.1 Fe-S protein assembly co-chaperone HscB -
  EZJ17_RS02680 (EZJ17_02665) prmA 508882..509775 (+) 894 WP_067442594.1 50S ribosomal protein L11 methyltransferase -
  EZJ17_RS02685 (EZJ17_02670) - 510027..510842 (+) 816 WP_067442592.1 MJ0042-type zinc finger domain-containing protein -
  EZJ17_RS02690 (EZJ17_02675) - 510844..511098 (-) 255 WP_067442590.1 hypothetical protein -
  EZJ17_RS02700 (EZJ17_02685) - 511483..512142 (-) 660 WP_067444488.1 protein-L-isoaspartate O-methyltransferase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17798.92 Da        Isoelectric Point: 7.9741

>NTDB_id=351347 EZJ17_RS02665 WP_067442600.1 506830..507291(-) (recX) [Eikenella exigua strain PXX]
MTAVKSLRSRALDLLSRREMSQAELRRKLAPYAEDPAEINALLQEFAERNWQSDQRYAESYVYSKSSRYGRLRLAQGLQQ
QKLDNELIEAALPDRDSERATACAVLRKKFKQPPADFAAQQRAARFLAYRGFDSDTIRHALDTAWQDEEEWKE

Nucleotide


Download         Length: 462 bp        

>NTDB_id=351347 EZJ17_RS02665 WP_067442600.1 506830..507291(-) (recX) [Eikenella exigua strain PXX]
ATGACCGCCGTTAAATCCCTGCGCAGCCGCGCTTTAGATTTGTTGTCGCGTCGGGAAATGTCGCAGGCCGAACTGCGGCG
CAAACTCGCGCCCTATGCCGAAGATCCCGCCGAAATCAATGCTTTGCTGCAAGAGTTTGCCGAGCGCAACTGGCAATCCG
ATCAGCGCTACGCCGAAAGCTACGTATACAGCAAAAGCAGCCGCTACGGCCGCCTGCGCCTCGCCCAAGGCCTGCAACAG
CAAAAACTAGACAACGAGCTCATCGAAGCCGCACTGCCCGACCGCGACAGCGAACGCGCCACCGCCTGCGCCGTGCTGCG
CAAAAAGTTCAAACAGCCCCCCGCCGACTTCGCCGCACAGCAACGCGCCGCCCGTTTCCTCGCCTACCGCGGCTTCGACA
GCGACACCATCCGCCACGCGCTGGATACGGCCTGGCAGGATGAAGAAGAGTGGAAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

56.209

100

0.562

Multiple sequence alignment