Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   GL189_RS02640 Genome accession   NZ_CP046360
Coordinates   511451..511717 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 574     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 506451..516717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL189_RS02620 (GL189_02695) - 506662..507171 (+) 510 WP_000619943.1 GNAT family N-acetyltransferase -
  GL189_RS02625 (GL189_02700) pheT 507248..509653 (+) 2406 WP_061714000.1 phenylalanine--tRNA ligase subunit beta -
  GL189_RS02630 (GL189_02705) - 509721..510722 (-) 1002 WP_024477913.1 endonuclease/exonuclease/phosphatase family protein -
  GL189_RS02635 (GL189_02710) - 510878..511325 (+) 448 Protein_527 IS30 family transposase -
  GL189_RS02640 (GL189_02715) HI0659 511451..511717 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  GL189_RS02645 (GL189_02720) metE 511978..514227 (+) 2250 WP_024477912.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  GL189_RS02650 (GL189_02725) metF 514291..515157 (+) 867 WP_024477911.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=351327 GL189_RS02640 WP_001808618.1 511451..511717(+) (HI0659) [Streptococcus pneumoniae strain 574]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=351327 GL189_RS02640 WP_001808618.1 511451..511717(+) (HI0659) [Streptococcus pneumoniae strain 574]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534