Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AHTJR_RS13345 Genome accession   NZ_CP038009
Coordinates   2842971..2843855 (-) Length   294 a.a.
NCBI ID   WP_134252898.1    Uniprot ID   A0A4P7B655
Organism   Acinetobacter haemolyticus strain TJR01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2837971..2848855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJR_RS13320 (AHTJR_13320) miaB 2839100..2840551 (+) 1452 WP_004637839.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  AHTJR_RS13325 (AHTJR_13325) - 2840591..2841670 (+) 1080 WP_017394568.1 PhoH family protein -
  AHTJR_RS13330 (AHTJR_13330) ybeY 2841689..2842174 (+) 486 WP_134252896.1 rRNA maturation RNase YbeY -
  AHTJR_RS13335 (AHTJR_13335) - 2842186..2842485 (+) 300 WP_005083612.1 antibiotic biosynthesis monooxygenase family protein -
  AHTJR_RS13340 (AHTJR_13340) - 2842516..2842941 (-) 426 WP_134252897.1 hypothetical protein -
  AHTJR_RS13345 (AHTJR_13345) tonB2 2842971..2843855 (-) 885 WP_134252898.1 energy transducer TonB Machinery gene
  AHTJR_RS13350 (AHTJR_13350) - 2844091..2844774 (+) 684 WP_075316233.1 hypothetical protein -
  AHTJR_RS13355 (AHTJR_13355) - 2844969..2845685 (+) 717 WP_004637832.1 DUF3108 domain-containing protein -
  AHTJR_RS13360 (AHTJR_13360) - 2845830..2846405 (+) 576 WP_134252899.1 xanthine phosphoribosyltransferase -
  AHTJR_RS13370 (AHTJR_13370) - 2847659..2847904 (-) 246 WP_134252900.1 hypothetical protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33519.03 Da        Isoelectric Point: 6.8580

>NTDB_id=351248 AHTJR_RS13345 WP_134252898.1 2842971..2843855(-) (tonB2) [Acinetobacter haemolyticus strain TJR01]
MWNKINFRTQMTSFWWQDPIFVGAVVIAIMVHGLVLTTQFSMPAPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSSMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=351248 AHTJR_RS13345 WP_134252898.1 2842971..2843855(-) (tonB2) [Acinetobacter haemolyticus strain TJR01]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTCTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAATCATGGTACATGGCCTCGTACTGACAACACAATTTTCGATGCCGGCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCTACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTCCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAACGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGGCAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCGTATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTCCGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAGTATGAAAGATATTTCTGAGTTACGCATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P7B655

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.83

100

0.748

Multiple sequence alignment