Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AHTJR_RS09355 Genome accession   NZ_CP038009
Coordinates   1969350..1970303 (-) Length   317 a.a.
NCBI ID   WP_134252534.1    Uniprot ID   A0A4P7B5T5
Organism   Acinetobacter haemolyticus strain TJR01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1964350..1975303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJR_RS09330 (AHTJR_09330) - 1964398..1965189 (-) 792 WP_213075541.1 DUF4198 domain-containing protein -
  AHTJR_RS09335 (AHTJR_09335) - 1965420..1966640 (+) 1221 WP_134252530.1 MFS transporter -
  AHTJR_RS09340 (AHTJR_09340) - 1966686..1967636 (-) 951 WP_134252532.1 siderophore ABC transporter substrate-binding protein -
  AHTJR_RS09345 (AHTJR_09345) - 1967646..1968410 (-) 765 WP_005081102.1 ABC transporter ATP-binding protein -
  AHTJR_RS09350 (AHTJR_09350) - 1968401..1969357 (-) 957 WP_005081105.1 iron chelate uptake ABC transporter family permease subunit -
  AHTJR_RS09355 (AHTJR_09355) ceuB 1969350..1970303 (-) 954 WP_134252534.1 ABC transporter permease Machinery gene
  AHTJR_RS09360 (AHTJR_09360) - 1970622..1971239 (-) 618 WP_134252535.1 LysE family translocator -
  AHTJR_RS09365 (AHTJR_09365) - 1971330..1972304 (-) 975 WP_004638650.1 ion transporter -
  AHTJR_RS09370 (AHTJR_09370) - 1972574..1974031 (+) 1458 WP_134252537.1 DASS family sodium-coupled anion symporter -
  AHTJR_RS09375 (AHTJR_09375) - 1974183..1974764 (-) 582 WP_005081115.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34441.57 Da        Isoelectric Point: 9.6461

>NTDB_id=351244 AHTJR_RS09355 WP_134252534.1 1969350..1970303(-) (ceuB) [Acinetobacter haemolyticus strain TJR01]
MIKRRYLLVLLIPLALISLFVGVGDMSLAGLIAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLISIILLPSASIFAKTGFAIIVTLIGAMTFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQLDL
LQNLAGWLQGDFSTILNGQYELIYLSIPVLALIYIFANRFVLAGLGEDFATNLGLNYKQALFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDHIRKTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSVIFLWLLLRRYRYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=351244 AHTJR_RS09355 WP_134252534.1 1969350..1970303(-) (ceuB) [Acinetobacter haemolyticus strain TJR01]
ATGATTAAACGGCGCTATTTACTGGTTTTACTCATACCTTTGGCATTGATTTCCTTGTTTGTTGGTGTTGGGGATATGAG
CCTTGCTGGATTGATTGCAGGCAATCCACAAGATTGGCAACTCTTTTGGACGAGTCGATTACCACGCCTGATGGCGATTG
TTGTTGCAGGTGCTGGGTTAAGTGTCTGCGGTTTAATTATGCAGTCATTAAGTCGAAATCGCTTTGTTTCACCAACCACA
GCGGGTTTATATGACTGTGCACGGCTGGGCGTTTTGATTTCGATTATTTTGCTTCCAAGTGCTTCTATTTTTGCCAAAAC
TGGATTTGCGATTATTGTCACGCTGATTGGTGCGATGACATTTATGAGTATTCTTGCCACTTTAAAGCACCGAGATACGG
TGTTTGTGCCACTCGTTGGGATGATTTTTGGTAGCATTATTTCTGCATTTACGACTTTTATTGCTTTGCAACTTGATTTG
TTGCAGAACTTAGCAGGGTGGTTGCAAGGCGATTTCTCAACCATTTTGAATGGTCAATATGAATTGATTTATTTAAGTAT
TCCCGTTCTCGCCTTGATTTATATATTTGCCAATCGTTTTGTCTTGGCCGGCTTGGGTGAAGACTTTGCGACAAATCTAG
GTTTGAACTATAAACAGGCACTTTTCTTAGGTTTGCTGCTCGTCTCAGTAATTACTGGTGTAGTGATTGTGACTGTCGGC
GCAATTCCTTTTCTCGGTTTAATTGTACCAAATCTAGTCAGCCTTTATTTAGGCGATCATATTCGCAAAACGCTTTCACA
TACGGCATTGCTTGGTGCATTGCTGGTCTTACTGTGTGATGTTTTTGGTCGAGTGGTGATTTATCCCTATGAGGTTTCGG
TCAGCCTGATCATGGGTGTAGTCGGTAGTGTGATCTTCCTGTGGTTATTACTCAGGAGGTATCGATATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P7B5T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

98.738

0.489

Multiple sequence alignment