Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   GL188_RS02655 Genome accession   NZ_CP046359
Coordinates   516402..516668 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 573     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 511402..521668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL188_RS02635 (GL188_02715) - 511613..512122 (+) 510 WP_197120281.1 GNAT family N-acetyltransferase -
  GL188_RS02640 (GL188_02720) pheT 512199..514604 (+) 2406 WP_061714000.1 phenylalanine--tRNA ligase subunit beta -
  GL188_RS02645 (GL188_02725) - 514672..515673 (-) 1002 WP_024477913.1 endonuclease/exonuclease/phosphatase family protein -
  GL188_RS02650 (GL188_02730) - 515829..516276 (+) 448 Protein_531 IS30 family transposase -
  GL188_RS02655 (GL188_02735) HI0659 516402..516668 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  GL188_RS02660 (GL188_02740) metE 516929..519178 (+) 2250 WP_024477912.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  GL188_RS02665 (GL188_02745) metF 519242..520108 (+) 867 WP_024477911.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=351210 GL188_RS02655 WP_001808618.1 516402..516668(+) (HI0659) [Streptococcus pneumoniae strain 573]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=351210 GL188_RS02655 WP_001808618.1 516402..516668(+) (HI0659) [Streptococcus pneumoniae strain 573]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534