Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GL186_RS11155 Genome accession   NZ_CP046358
Coordinates   1445013..1445735 (-) Length   240 a.a.
NCBI ID   WP_024477841.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 566     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440013..1450735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL186_RS07295 (GL186_07445) - 1442588..1443754 (-) 1167 WP_024477840.1 MalY/PatB family protein -
  GL186_RS07300 (GL186_07450) - 1443762..1444856 (-) 1095 WP_000031964.1 cystathionine gamma-synthase -
  GL186_RS11155 rcrP 1445013..1445735 (-) 723 WP_024477841.1 ABC transporter ATP-binding protein Regulator
  GL186_RS11160 - 1445739..1446695 (-) 957 WP_024477842.1 ABC transporter ATP-binding protein -
  GL186_RS07310 (GL186_07460) amiA 1446867..1448825 (-) 1959 WP_024477843.1 peptide ABC transporter substrate-binding protein Regulator
  GL186_RS07315 (GL186_07465) - 1449028..1450650 (-) 1623 WP_000017793.1 putative polysaccharide biosynthesis protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27102.94 Da        Isoelectric Point: 5.0452

>NTDB_id=351180 GL186_RS11155 WP_024477841.1 1445013..1445735(-) (rcrP) [Streptococcus pneumoniae strain 566]
MNFNHVYFGYDENRPVLKDITCSIFKGKKIAFVGPSGSGKSTIVRLLERFYKPLSGDILMEQSSIYDFNLKEWRSKIAWV
SQNNAVLSGSIRDNLCLGLNRLVTDDELMKVLDLVSLGDEIRSMKEGLDTEVGERGRFLSGGQSQRLQIARAYLKDAEIL
IFDEATANLDADSEYAIISSLYSVLKEKTVVIIAHSLSTVKDVDCIFFLEEGKITGSGTHKELLENHERYARFVQEQMIE

Nucleotide


Download         Length: 723 bp        

>NTDB_id=351180 GL186_RS11155 WP_024477841.1 1445013..1445735(-) (rcrP) [Streptococcus pneumoniae strain 566]
TTGAATTTTAACCATGTCTATTTTGGTTATGATGAAAATCGACCTGTCTTAAAGGATATTACTTGTTCAATTTTCAAGGG
GAAAAAAATTGCTTTTGTTGGACCATCTGGATCAGGAAAATCAACGATTGTGCGTTTGTTAGAGCGGTTTTATAAACCGC
TTTCAGGAGATATTCTAATGGAGCAATCAAGTATATATGATTTTAACTTAAAAGAATGGAGAAGTAAAATCGCTTGGGTT
TCACAAAATAATGCAGTCTTATCTGGCAGTATTCGTGACAATCTTTGTCTCGGTTTGAATCGCTTAGTAACTGATGATGA
ATTGATGAAAGTGCTAGACTTAGTATCACTAGGTGATGAGATTCGCTCCATGAAAGAGGGACTAGATACTGAAGTTGGTG
AACGCGGACGATTCTTGTCAGGGGGGCAAAGCCAAAGACTTCAAATAGCTAGAGCCTACTTAAAAGATGCTGAAATTCTT
ATATTTGATGAAGCCACTGCTAATCTTGATGCGGATTCTGAGTATGCGATTATCAGTAGCCTCTATTCTGTATTAAAGGA
GAAGACGGTTGTGATTATAGCGCATAGTTTGTCAACGGTAAAAGATGTGGATTGTATTTTCTTCTTAGAGGAGGGGAAAA
TCACTGGCTCAGGAACTCATAAGGAACTACTGGAAAATCATGAGCGTTATGCTCGTTTTGTGCAGGAGCAAATGATAGAG
TGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-167)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

36.82

99.583

0.367
  comA Streptococcus mitis SK321

37.179

97.5

0.362