Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   APRE_RS02240 Genome accession   NC_013171
Coordinates   476416..478167 (-) Length   583 a.a.
NCBI ID   WP_015777379.1    Uniprot ID   C7RG56
Organism   Anaerococcus prevotii DSM 20548     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 471416..483167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APRE_RS02225 (Apre_0415) - 472584..473378 (+) 795 WP_015777376.1 ZIP family metal transporter -
  APRE_RS02230 (Apre_0416) - 473715..474536 (+) 822 WP_015777377.1 glycosyltransferase family 8 protein -
  APRE_RS02235 (Apre_0417) rcrQ 474630..476423 (-) 1794 WP_015777378.1 ABC transporter ATP-binding protein Regulator
  APRE_RS02240 (Apre_0418) rcrP 476416..478167 (-) 1752 WP_015777379.1 ABC transporter ATP-binding protein Regulator
  APRE_RS02245 (Apre_0419) - 478139..478621 (-) 483 WP_015777380.1 MarR family winged helix-turn-helix transcriptional regulator -
  APRE_RS02250 (Apre_0420) - 479027..479335 (+) 309 WP_015777381.1 hypothetical protein -
  APRE_RS02255 (Apre_0422) - 479941..480336 (-) 396 Protein_425 transposase -
  APRE_RS02260 (Apre_0423) - 480441..480902 (-) 462 WP_015777383.1 flavodoxin -
  APRE_RS09880 (Apre_0425) - 481505..481633 (-) 129 WP_015777384.1 LDCC motif putative metal-binding protein -
  APRE_RS10020 (Apre_0426) - 481895..482047 (+) 153 WP_015777385.1 YkvA family protein -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 65365.52 Da        Isoelectric Point: 8.8374

>NTDB_id=35113 APRE_RS02240 WP_015777379.1 476416..478167(-) (rcrP) [Anaerococcus prevotii DSM 20548]
MIKILKYLNKKQGLQIFISLLLIVASVYLDLKIPDYMAKITMYVQTPGHSVSEIIGEGKWMILCALASLLSAVLVGYLSS
VIASSFAKDLRSRLFAKVESFSQKEINKFSTASLITRSTNDITQIQMAIIMGLQILIKAPIMAVWAITKIYNKGFEWTVA
TAITLLILIVFVAIVMILVMPKFKIMQTLTDNINRVLRENLTGLSVIRAYNSESYREDKFAEANKELTQTQLFTSKLMAT
LFPTINLAMSILTLVIYFIGAGLISGAGLMDKYSLFSDMVVFSSYAMQVIMSFMMMSMIFIMLPRAEVSASRINEVLDTK
LSIVDGSKKEANKDCPYIIEFDNVSFKYQDSEQYILKDINFKVKKGEKVAIIGSTGSGKSTILNLLMRFYDTSEGSIKID
GLDIRDYKLSDLYNKLGPVLQKSFLFKGDIKSNISFADESSDLDKIKKAADIAQASEFIEKYDDKFDHEIAQLGKNVSGG
QKQRLAIARAIYKNPDIYLFDDSFSALDFKTDRDLRHRLKEAYPEATILVVAQRVGSIMDSDQIIVLDNGEIVGLGKHKD
LLQTSRVYKEIASSQLSKEELDG

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=35113 APRE_RS02240 WP_015777379.1 476416..478167(-) (rcrP) [Anaerococcus prevotii DSM 20548]
ATGATAAAGATTTTGAAATATTTAAATAAAAAACAAGGCCTTCAAATATTTATAAGCCTACTTTTGATAGTAGCTTCTGT
GTATTTGGACCTAAAGATTCCTGACTATATGGCAAAGATTACCATGTATGTCCAAACACCTGGCCACAGTGTAAGCGAAA
TTATAGGAGAAGGTAAATGGATGATCCTATGCGCCTTGGCTTCTCTCCTATCCGCTGTTTTAGTGGGTTACCTATCTAGT
GTAATTGCTTCGTCCTTTGCGAAAGATCTAAGATCAAGGCTTTTTGCTAAGGTAGAATCTTTCTCCCAAAAGGAAATTAA
CAAATTTTCGACTGCAAGTCTTATAACAAGATCAACAAACGACATCACCCAAATCCAAATGGCGATTATAATGGGCCTAC
AAATCCTAATCAAGGCTCCAATCATGGCTGTTTGGGCCATTACAAAAATCTATAACAAGGGCTTTGAATGGACAGTCGCA
ACAGCTATCACTCTTCTTATCCTTATAGTTTTCGTGGCTATCGTTATGATTTTGGTTATGCCTAAATTTAAGATAATGCA
GACTTTAACTGATAATATCAACAGGGTCCTAAGGGAGAACTTGACAGGGCTTTCTGTAATAAGGGCCTACAATTCCGAAA
GCTACAGGGAAGATAAATTTGCCGAGGCCAATAAAGAGTTGACCCAGACCCAACTTTTTACAAGTAAGCTAATGGCGACA
CTCTTTCCTACAATTAACCTTGCCATGTCCATCTTAACCCTTGTGATTTATTTTATAGGGGCAGGACTCATCAGCGGAGC
TGGTCTTATGGACAAATACAGCCTGTTTTCCGATATGGTCGTATTTTCTTCCTACGCCATGCAGGTTATCATGTCCTTTA
TGATGATGAGTATGATTTTTATTATGCTACCTAGGGCGGAAGTTTCTGCAAGCCGTATCAATGAAGTCCTAGATACCAAG
CTTTCCATTGTAGATGGATCTAAAAAAGAAGCTAACAAAGATTGCCCTTATATCATAGAATTTGATAATGTTTCCTTCAA
ATATCAGGACTCAGAGCAATATATCCTAAAAGATATAAACTTTAAGGTAAAAAAGGGCGAGAAGGTCGCCATAATCGGAT
CTACTGGATCAGGTAAAAGTACAATCCTAAATCTCTTGATGAGATTTTACGATACAAGCGAGGGATCTATCAAGATAGAT
GGCCTCGATATCAGAGACTATAAGCTTTCTGACCTCTATAATAAGCTGGGTCCAGTCTTGCAGAAATCTTTCCTCTTTAA
GGGAGATATCAAGTCAAATATTTCCTTCGCAGATGAGTCTTCCGATTTGGACAAAATCAAGAAGGCAGCAGATATTGCTC
AAGCAAGCGAATTTATAGAAAAATATGATGATAAATTCGACCACGAGATAGCCCAACTTGGTAAAAACGTCTCAGGAGGA
CAAAAGCAAAGACTTGCTATAGCAAGGGCCATCTACAAGAACCCTGACATCTATCTTTTTGATGACTCCTTCTCTGCCCT
AGACTTTAAGACTGATCGTGATCTAAGACATAGACTAAAGGAAGCATATCCTGAAGCTACAATCCTAGTAGTTGCCCAAA
GAGTTGGTTCAATTATGGATTCTGATCAGATAATAGTTCTTGATAATGGAGAAATAGTAGGGCTCGGCAAGCACAAGGAC
CTTCTTCAAACTTCTAGAGTCTATAAGGAAATAGCTAGTTCTCAACTTAGTAAGGAGGAATTAGATGGCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(356-503)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C7RG56

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

48.241

100

0.494

Multiple sequence alignment