Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EQG49_RS04005 Genome accession   NZ_CP037940
Coordinates   870522..872300 (-) Length   592 a.a.
NCBI ID   WP_207668563.1    Uniprot ID   -
Organism   Periweissella cryptocerci strain 26KH-42     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 865522..877300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQG49_RS03985 (EQG49_03985) - 866531..867643 (-) 1113 WP_133362756.1 NAD(P)-dependent alcohol dehydrogenase -
  EQG49_RS03990 (EQG49_03990) scrK 867761..868636 (-) 876 WP_133362757.1 fructokinase ScrK -
  EQG49_RS03995 (EQG49_03995) - 868973..869617 (-) 645 WP_133362758.1 NAD(P)H-binding protein -
  EQG49_RS04000 (EQG49_04000) - 869751..870200 (-) 450 WP_133362759.1 MerR family transcriptional regulator -
  EQG49_RS04005 (EQG49_04005) rcrQ 870522..872300 (-) 1779 WP_207668563.1 ABC transporter ATP-binding protein Regulator
  EQG49_RS04010 (EQG49_04010) rcrP 872351..874108 (-) 1758 WP_133362761.1 ABC transporter ATP-binding protein Regulator
  EQG49_RS04015 (EQG49_04015) - 874168..874629 (-) 462 WP_165964768.1 MarR family transcriptional regulator -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 64958.89 Da        Isoelectric Point: 5.3763

>NTDB_id=350776 EQG49_RS04005 WP_207668563.1 870522..872300(-) (rcrQ) [Periweissella cryptocerci strain 26KH-42]
MGGRNRGKGEKPKNIKKALTDLAVYCKPYLVPVILAVVTAALGSYFTIIGPDQLSKITDTITAGMMGKIDMAKVGRIGVF
LACLYGAGALLTYVQGFVMATVTQKVSKRLRKDISSKINRLPLRYFDGHPYGDTLSRVTNDVDTIGQAMNQSVGSLVSAI
TLFVGSLVMMFKTNVEMTLTAILSTVIGFGLMMLIMAKSQKYFNNQQNGLGEVNGFVEEIYTGHNVVKVYNADKEMINKF
DDINDRLYDSVWKSQFLSGLMMPLMQFIGNFGYAAVCVVGAVLAIDGKISFGVIVAFMVYIRIFTQPLTQIAQAVTSLQS
AGAASERVFTFFAEKELEVETDQLKHIENATGTVEFDHVRFGYDENKIIINDFSAKAESGQKVAIVGPTGAGKTTMVNLL
MKFYETNSGTIKIDGVPLENLTREAVHEQFTMVLQDTWLFEGTVKENIIYNQKGITDEQVIAACEAAGVDHYIKTLPNGY
DSVIEADELSAGERQLLTIARALVKNAPMLILDEATSSVDTRTEELIQNAMDHLMSNRTSFVIAHRLSTIKNADLILVMN
DGDIIESGNHADLLAQKGFYADLYNSQFESVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=350776 EQG49_RS04005 WP_207668563.1 870522..872300(-) (rcrQ) [Periweissella cryptocerci strain 26KH-42]
ATGGGCGGCCGTAACCGTGGCAAAGGTGAAAAGCCAAAGAATATTAAAAAAGCACTGACGGATTTAGCCGTATACTGTAA
GCCGTATTTGGTACCCGTGATTCTTGCGGTGGTAACAGCAGCACTTGGTAGTTACTTTACCATTATTGGCCCCGACCAAT
TGAGTAAGATTACAGATACAATCACCGCAGGTATGATGGGCAAAATCGATATGGCGAAAGTTGGCCGTATCGGGGTCTTC
CTAGCGTGCTTATATGGTGCCGGGGCGCTCTTGACGTATGTGCAAGGATTTGTCATGGCAACTGTAACGCAAAAAGTTTC
CAAGCGTTTGCGTAAAGACATTTCAAGTAAAATTAACCGCTTGCCACTGCGCTATTTCGATGGGCACCCATATGGTGATA
CGCTTTCACGCGTGACCAATGACGTGGACACTATCGGACAAGCAATGAATCAAAGTGTCGGTTCATTAGTGTCAGCGATT
ACGTTGTTTGTCGGTTCATTAGTGATGATGTTTAAGACGAACGTAGAAATGACTTTGACGGCTATTCTGTCAACGGTAAT
CGGCTTTGGTTTGATGATGTTGATTATGGCGAAGTCCCAAAAATACTTCAACAACCAACAAAATGGTTTGGGTGAAGTGA
ACGGGTTCGTGGAAGAAATTTACACGGGTCACAATGTCGTGAAAGTTTACAACGCCGACAAAGAAATGATTAACAAGTTT
GATGACATTAACGACCGTCTTTACGATAGTGTGTGGAAATCACAATTCTTGTCAGGCTTGATGATGCCCTTGATGCAATT
CATCGGTAACTTCGGTTATGCTGCGGTCTGTGTGGTTGGTGCGGTCTTAGCGATTGATGGCAAGATTTCATTTGGTGTGA
TTGTTGCCTTCATGGTCTACATCCGTATTTTCACCCAACCATTGACGCAAATCGCCCAAGCGGTGACAAGCTTGCAATCC
GCTGGTGCCGCAAGTGAACGGGTCTTCACTTTCTTTGCTGAAAAAGAATTGGAAGTGGAAACTGACCAATTGAAGCACAT
CGAAAACGCGACTGGTACAGTTGAATTTGACCACGTACGCTTCGGTTACGATGAAAACAAAATCATCATCAACGACTTCT
CCGCTAAGGCTGAATCTGGTCAAAAGGTGGCGATTGTTGGACCCACTGGTGCTGGTAAGACGACGATGGTTAACTTATTG
ATGAAGTTCTACGAAACCAATTCCGGCACCATCAAAATTGACGGTGTCCCGCTCGAAAACTTAACCCGTGAAGCGGTCCA
CGAACAATTCACGATGGTGCTCCAAGACACGTGGTTGTTTGAAGGTACGGTTAAGGAAAATATCATCTACAACCAAAAGG
GCATCACGGATGAACAAGTCATCGCTGCCTGTGAAGCTGCCGGCGTCGACCACTACATCAAGACGTTACCAAATGGCTAT
GATTCTGTGATTGAAGCGGACGAATTATCAGCCGGTGAACGCCAACTCTTAACGATTGCTCGTGCTTTAGTTAAGAACGC
ACCAATGCTAATCCTTGATGAAGCCACTTCATCTGTTGATACGCGGACGGAAGAATTGATTCAAAACGCCATGGATCACT
TGATGAGCAACCGGACTTCATTTGTGATTGCGCACCGCCTGTCAACGATTAAAAATGCCGATTTGATTTTGGTTATGAAT
GATGGTGATATTATCGAATCTGGTAACCACGCTGACTTGTTGGCGCAAAAGGGCTTCTATGCCGACTTGTATAATTCACA
GTTTGAGAGTGTGGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(33-308)

ABC transporter (ABC_tran)

(371-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

62.176

97.804

0.608

Multiple sequence alignment