Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   EQG49_RS01705 Genome accession   NZ_CP037940
Coordinates   380649..382454 (-) Length   601 a.a.
NCBI ID   WP_133362345.1    Uniprot ID   -
Organism   Periweissella cryptocerci strain 26KH-42     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 375649..387454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQG49_RS01670 (EQG49_01670) rpsN 375878..376147 (-) 270 WP_133362338.1 30S ribosomal protein S14 -
  EQG49_RS01675 (EQG49_01675) rpmG 376150..376299 (-) 150 WP_133362339.1 50S ribosomal protein L33 -
  EQG49_RS01680 (EQG49_01680) - 376474..377229 (-) 756 WP_133362340.1 ABC transporter permease -
  EQG49_RS01685 (EQG49_01685) - 377222..377929 (-) 708 WP_133362341.1 ATP-binding cassette domain-containing protein -
  EQG49_RS01690 (EQG49_01690) - 377913..378926 (-) 1014 WP_133362342.1 ABC transporter substrate-binding protein -
  EQG49_RS01695 (EQG49_01695) - 379198..379584 (-) 387 WP_133362343.1 hypothetical protein -
  EQG49_RS01700 (EQG49_01700) - 379584..380528 (-) 945 WP_133362344.1 hypothetical protein -
  EQG49_RS01705 (EQG49_01705) pepF 380649..382454 (-) 1806 WP_133362345.1 oligoendopeptidase F Regulator
  EQG49_RS01710 (EQG49_01710) - 382521..383633 (-) 1113 WP_133362346.1 competence protein CoiA family protein -
  EQG49_RS13885 - 383887..384222 (+) 336 WP_243115724.1 hypothetical protein -
  EQG49_RS13890 - 384333..385187 (+) 855 WP_243115725.1 transposase -
  EQG49_RS13895 - 385207..385440 (+) 234 WP_279232830.1 transposase -
  EQG49_RS01720 (EQG49_01720) - 385560..386318 (-) 759 WP_133362347.1 adaptor protein MecA -
  EQG49_RS01725 (EQG49_01725) spx 386562..386966 (-) 405 WP_133362348.1 transcriptional regulator Spx -

Sequence

Protein


Download         Length: 601 a.a.        Molecular weight: 67448.99 Da        Isoelectric Point: 4.4996

>NTDB_id=350770 EQG49_RS01705 WP_133362345.1 380649..382454(-) (pepF) [Periweissella cryptocerci strain 26KH-42]
MSEVKQLPLREELPESQTWDLAKIYSTDEAWEAEYQAVEATFSDVAKYAGTLANSAATLLDATKALLELTRKIEKIYVYA
SMKSDQDTANSKYQGYNAQAGALWAKVSGAIAFFEPEVIGIEPTTLAGFLAENAELAKYTHFFDQITQARGHVLSPSEEK
LLAGATDIFDASQNTFGVLDNADLKFGIVQDEDGNDVELSNGVYSKHLESTDRKVRKQAFDTLYATYDQFQHTFASTLSQ
HTHGHNYLASVHNYDSARQSALAATTIPETVFETLVAQVNDHLPLLHRYVALRKKVLQLDELHTYDLYTPITGEASLSYD
YEAAKAEALQALKPLGDDYLAIVQEAFDNRWIDVVENKGKRSGAYSGGAYDTDPYILLNWQDNLDNLFTLVHEMGHSVHS
YYTRHNQPVQYGDYTIFLAEIASTSNENILTDYLLKTQTDPKVRAYVLNHYLDGFKGTVFRQTQFAEFEHWIHAEDAAGA
PLTADTMSAFYADLNKRYYGPALEFDDAIALEWARIPHFYYNYYVFQYATGMSAATTLAHNITTGVDGAVDAYKTYLKAG
NSDFPIEVMKQAGVDMTKPDYLEEAFKVFEERLNELEALIG

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=350770 EQG49_RS01705 WP_133362345.1 380649..382454(-) (pepF) [Periweissella cryptocerci strain 26KH-42]
ATGTCAGAAGTAAAGCAATTACCACTCCGAGAAGAACTTCCTGAATCACAAACCTGGGATTTGGCAAAAATTTATAGTAC
CGATGAAGCTTGGGAAGCTGAATACCAAGCTGTCGAAGCAACGTTTAGCGATGTTGCCAAATACGCTGGTACATTAGCTA
ACTCTGCAGCAACATTGTTAGACGCAACGAAGGCGCTATTGGAATTAACGCGTAAGATTGAAAAAATTTACGTGTATGCG
TCAATGAAATCTGACCAAGATACGGCTAACTCAAAGTATCAAGGTTATAATGCTCAAGCTGGGGCTTTGTGGGCTAAGGT
GAGTGGCGCGATTGCTTTCTTTGAACCCGAAGTGATTGGTATCGAACCTACAACCTTAGCGGGATTCCTTGCAGAAAATG
CCGAATTAGCTAAATATACGCACTTCTTTGACCAAATTACACAAGCACGTGGACATGTGTTAAGCCCTAGCGAAGAAAAA
TTATTAGCGGGCGCGACCGATATTTTTGACGCATCACAAAATACATTCGGAGTTTTAGATAATGCTGACTTAAAGTTTGG
GATTGTTCAAGATGAGGATGGCAATGATGTTGAGTTATCAAACGGGGTTTATTCAAAGCACTTAGAATCAACTGATCGTA
AGGTTCGTAAGCAAGCGTTTGATACGTTGTATGCCACATATGACCAATTCCAACACACGTTTGCTTCAACGTTGTCACAA
CACACGCATGGGCACAATTATTTAGCTTCAGTGCATAACTATGATTCAGCACGCCAATCTGCTTTGGCTGCGACAACTAT
TCCAGAAACGGTTTTTGAAACTCTAGTTGCCCAAGTTAATGATCATTTACCACTGTTACACCGTTATGTGGCTTTGCGTA
AAAAGGTCTTACAACTTGATGAATTACACACATATGATTTATACACGCCAATCACTGGTGAAGCTTCATTATCATATGAT
TACGAAGCAGCCAAAGCTGAAGCCCTTCAAGCGCTTAAGCCATTGGGTGACGATTACTTGGCGATTGTCCAAGAAGCGTT
CGACAACCGCTGGATTGATGTAGTTGAAAACAAGGGTAAGCGTTCTGGTGCATATTCTGGTGGTGCATATGATACTGACC
CATACATTTTATTGAACTGGCAAGATAATTTAGATAACTTGTTCACGTTAGTTCACGAAATGGGACACTCAGTGCACTCA
TATTACACACGTCACAATCAACCAGTACAATATGGTGATTACACAATCTTCTTGGCTGAAATTGCGTCAACATCAAATGA
AAATATTTTGACTGATTATTTGTTGAAGACCCAAACTGATCCTAAGGTTCGGGCGTATGTTTTGAACCACTACCTTGATG
GATTTAAGGGCACGGTCTTCCGTCAAACTCAATTTGCGGAATTTGAACACTGGATTCACGCAGAAGATGCTGCTGGTGCG
CCATTGACGGCGGACACAATGAGTGCTTTCTATGCGGACTTGAACAAGCGTTACTACGGTCCAGCGCTTGAATTTGATGA
TGCAATTGCCTTAGAATGGGCACGGATTCCCCACTTCTACTACAATTACTACGTGTTCCAATATGCAACGGGGATGTCAG
CAGCCACAACATTGGCGCATAATATCACAACAGGTGTTGATGGGGCAGTTGATGCTTATAAGACATACTTGAAGGCTGGT
AACTCAGACTTCCCAATCGAAGTTATGAAGCAGGCCGGTGTGGATATGACTAAACCTGATTACCTTGAAGAAGCATTTAA
GGTTTTTGAAGAACGCCTAAATGAATTAGAAGCATTAATTGGGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(208-587)

Oligopeptidase F (Peptidase_M3_N)

(118-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.25

98.502

0.554

Multiple sequence alignment