Detailed information NTG0035052

Bioinformatically predicted

Overview

• Name: eppA
• Type: Machinery gene
• Locus tag: MEFER_RS04710
• Genome accession: NC_013156
• Coordinates: 873591..874613 (-)
• Length: 340 a.a.
• NCBI ID: WP_015791482.1
• Uniprot ID: C7P863
• Organism: Methanocaldococcus fervens AG86
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 868591..879613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MEFER_RS04690 (Mefer_0923)	-	870405..870863 (-)	459	WP_245527774.1	class III signal peptide-containing protein	-
MEFER_RS08195 (Mefer_0924)	-	870851..871993 (-)	1143	WP_015791479.1	hypothetical protein	-
MEFER_RS04700 (Mefer_0925)	-	871986..873155 (-)	1170	WP_015791480.1	DUF515 domain-containing protein	-
MEFER_RS04705 (Mefer_0926)	-	873189..873578 (-)	390	WP_015791481.1	class III signal peptide-containing protein	-
MEFER_RS04710 (Mefer_0927)	eppA	873591..874613 (-)	1023	WP_015791482.1	A24 family peptidase C-terminal domain-containing protein	Machinery gene
MEFER_RS04715 (Mefer_0928)	-	874618..874977 (-)	360	WP_015791483.1	cysteine-rich small domain-containing protein	-
MEFER_RS04720 (Mefer_0929)	mptB	875052..875780 (+)	729	WP_015791484.1	dihydroneopterin 2',3'-cyclic phosphate phosphodiesterase	-
MEFER_RS04735 (Mefer_0930)	-	876277..876942 (+)	666	WP_048056329.1	DUF166 domain-containing protein	-
MEFER_RS04740 (Mefer_0931)	priS	876988..878034 (-)	1047	WP_015791486.1	DNA primase catalytic subunit PriS	-
MEFER_RS04745 (Mefer_0932)	mfnF	878104..879096 (+)	993	WP_211204163.1	(4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 39326.28 Da
• Isoelectric Point: 7.7168

>NTDB_id=35052 MEFER_RS04710 WP_015791482.1 873591..874613(-) (eppA) [Methanocaldococcus fervens AG86]
MDLLGIVYIVNFILLILASITDIGERIIPHKYTIAMIIMNLAVGYYYFGFDAIVAFFSTFILCLILSIGMGGGDVKLFTA
LAPIFAYPNSFVFYIPKYILYLIAISMFIAAIFPMFKILIRYWRDILPSACYLTMIIGILYYFINIYKIPYASIVVWTYI
IISIFISRKFPKYKDYTKKLGYLFPVYLIFLYIFDTSYFINYNILVTSIIYLCEIILISVVIYALTGVETSDKKSVEELE
EGDILRDVIIIGKDNNVEVKNLNIMKRIKFLLEHEIKKDEKEIILTDGEGLSKEDIEKIKRLHREGKIPDSLNVIKTYPF
VPFVVVGYLITLMLISFSII

Nucleotide

• Length: 1023 bp

>NTDB_id=35052 MEFER_RS04710 WP_015791482.1 873591..874613(-) (eppA) [Methanocaldococcus fervens AG86]
GTGGATTTATTGGGCATAGTTTATATTGTTAATTTTATTTTACTTATTTTGGCATCTATCACGGATATTGGAGAGAGGAT
TATTCCACATAAATATACAATCGCCATGATTATAATGAATTTAGCTGTTGGCTATTATTATTTTGGATTTGATGCTATTG
TTGCATTCTTCTCCACTTTTATTTTATGCTTAATATTAAGTATAGGGATGGGGGGAGGAGATGTTAAGCTATTCACAGCC
TTAGCTCCTATTTTTGCATATCCAAATTCTTTTGTATTTTATATTCCAAAATACATCCTTTACTTAATAGCAATAAGTAT
GTTTATTGCTGCAATTTTTCCAATGTTTAAGATTTTAATCAGGTATTGGAGAGATATACTACCTTCAGCATGTTATTTAA
CTATGATTATTGGCATTTTATACTATTTCATAAATATCTACAAAATTCCATACGCTTCAATAGTTGTGTGGACTTATATT
ATAATTTCCATATTTATTTCAAGAAAGTTTCCAAAGTATAAGGATTATACAAAAAAATTAGGGTATCTCTTCCCAGTTTA
TTTGATATTCCTTTATATCTTTGATACATCTTACTTTATTAATTACAATATATTGGTAACCTCAATAATATACCTTTGCG
AGATAATACTAATATCTGTAGTGATTTACGCCCTTACGGGAGTGGAAACCTCAGATAAAAAATCTGTTGAAGAGTTAGAG
GAGGGGGATATTCTAAGGGATGTAATAATTATAGGTAAGGATAATAATGTTGAAGTAAAAAATTTAAATATTATGAAAAG
GATAAAATTTCTATTAGAACATGAAATTAAAAAAGATGAAAAAGAAATAATATTAACCGATGGTGAAGGGCTTTCCAAAG
AAGATATCGAAAAAATAAAAAGACTTCACAGGGAGGGGAAAATTCCTGATAGTTTAAATGTTATAAAGACATATCCGTTT
GTTCCATTTGTTGTTGTTGGTTATTTGATAACATTGATGTTGATATCATTCTCTATAATATAA

Domains

Predicted by InterproScan.

• Archaeal Peptidase A24 C-terminal Domain (Arc_PepC) (208-314)

• Type IV leader peptidase family (Peptidase_A24) (9-114)

3D structure

• AlphaFold DB: C7P863

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
eppA	Methanococcus maripaludis strain DSM 2067	52.711	97.647	0.515