Detailed information    

insolico Bioinformatically predicted

Overview


Name   recJ   Type   Machinery gene
Locus tag   MGAS15252_RS03665 Genome accession   NC_017040
Coordinates   734727..736937 (+) Length   736 a.a.
NCBI ID   WP_014407518.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS15252     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 729727..741937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS15252_RS08680 (MGAS15252_0750) - 729874..730050 (-) 177 WP_002984898.1 DUF3042 family protein -
  MGAS15252_RS03640 (MGAS15252_0751) miaA 730184..731083 (+) 900 WP_014407515.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -
  MGAS15252_RS03645 (MGAS15252_0752) hflX 731156..732394 (+) 1239 WP_010922191.1 GTPase HflX -
  MGAS15252_RS03650 (MGAS15252_0753) - 732387..733022 (+) 636 WP_014407516.1 cystathionine beta-lyase -
  MGAS15252_RS03655 (MGAS15252_0754) rnz 733037..733966 (+) 930 WP_009881223.1 ribonuclease Z -
  MGAS15252_RS03660 (MGAS15252_0755) - 733966..734730 (+) 765 WP_014407517.1 SDR family NAD(P)-dependent oxidoreductase -
  MGAS15252_RS03665 (MGAS15252_0756) recJ 734727..736937 (+) 2211 WP_014407518.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  MGAS15252_RS03670 (MGAS15252_0757) - 737088..737606 (+) 519 WP_002990109.1 adenine phosphoribosyltransferase -
  MGAS15252_RS03675 (MGAS15252_0758) - 737687..738370 (+) 684 WP_002984890.1 DnaD domain-containing protein -
  MGAS15252_RS03680 (MGAS15252_0759) nth 738367..739023 (+) 657 WP_014407519.1 endonuclease III -
  MGAS15252_RS03685 (MGAS15252_0760) - 739095..739781 (+) 687 WP_002990104.1 tRNA (adenine(22)-N(1))-methyltransferase -
  MGAS15252_RS03690 (MGAS15252_0761) - 739771..740559 (+) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -
  MGAS15252_RS03695 (MGAS15252_0762) - 740599..741705 (+) 1107 WP_014407520.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence


Protein


Download         Length: 736 a.a.        Molecular weight: 82549.43 Da        Isoelectric Point: 4.8174

>NTDB_id=35046 MGAS15252_RS03665 WP_014407518.1 734727..736937(+) (recJ) [Streptococcus pyogenes MGAS15252]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEGLDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEARAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKAWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide


Download         Length: 2211 bp        

>NTDB_id=35046 MGAS15252_RS03665 WP_014407518.1 734727..736937(+) (recJ) [Streptococcus pyogenes MGAS15252]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGGCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCGAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGACCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAGCCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Streptococcus pneumoniae strain D39V

63.008

100

0.632

  recJ Bacillus subtilis subsp. subtilis str. 168

34.866

100

0.371


Multiple sequence alignment