Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | FOB91_RS09665 | Genome accession | NZ_CP046328 |
| Coordinates | 2006272..2006874 (-) | Length | 200 a.a. |
| NCBI ID | WP_012000083.1 | Uniprot ID | A8AVU3 |
| Organism | Streptococcus gordonii strain FDAARGOS_683 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2001272..2011874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB91_RS09650 (FOB91_09650) | - | 2002056..2002616 (+) | 561 | WP_012000080.1 | GNAT family N-acetyltransferase | - |
| FOB91_RS09655 (FOB91_09655) | pepC | 2002695..2004029 (+) | 1335 | WP_012000081.1 | aminopeptidase C | - |
| FOB91_RS09660 (FOB91_09660) | pbp1a | 2004141..2006279 (-) | 2139 | WP_012000082.1 | penicillin-binding protein PBP1A | - |
| FOB91_RS09665 (FOB91_09665) | recU | 2006272..2006874 (-) | 603 | WP_012000083.1 | Holliday junction resolvase RecU | Machinery gene |
| FOB91_RS09670 (FOB91_09670) | - | 2006940..2007467 (+) | 528 | WP_012000084.1 | DUF1273 domain-containing protein | - |
| FOB91_RS09675 (FOB91_09675) | gpsB | 2007537..2007887 (+) | 351 | WP_012000085.1 | cell division regulator GpsB | - |
| FOB91_RS09685 (FOB91_09685) | - | 2008428..2009594 (+) | 1167 | WP_012000086.1 | THUMP domain-containing class I SAM-dependent RNA methyltransferase | - |
| FOB91_RS09690 (FOB91_09690) | - | 2009597..2011003 (+) | 1407 | WP_012000087.1 | cell division site-positioning protein MapZ family protein | - |
| FOB91_RS09695 (FOB91_09695) | luxS | 2011064..2011546 (-) | 483 | WP_008808586.1 | S-ribosylhomocysteine lyase | Regulator |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 23189.78 Da Isoelectric Point: 9.8397
>NTDB_id=350445 FOB91_RS09665 WP_012000083.1 2006272..2006874(-) (recU) [Streptococcus gordonii strain FDAARGOS_683]
MVNYPHKLTSKNNIKKVKKETVDFANRGMTFEKMINDTNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYRGHYIDFEAKETRQKQSMPMKNFHAHQIEHMNQVLNQGGICFVLLHFSSLKETYLLPAPYLIEFYKIDKGG
KSMPLDYIQKHGYLIEQNILPSVPYLDIISKNLLGGHSNE
MVNYPHKLTSKNNIKKVKKETVDFANRGMTFEKMINDTNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYRGHYIDFEAKETRQKQSMPMKNFHAHQIEHMNQVLNQGGICFVLLHFSSLKETYLLPAPYLIEFYKIDKGG
KSMPLDYIQKHGYLIEQNILPSVPYLDIISKNLLGGHSNE
Nucleotide
Download Length: 603 bp
>NTDB_id=350445 FOB91_RS09665 WP_012000083.1 2006272..2006874(-) (recU) [Streptococcus gordonii strain FDAARGOS_683]
ATGGTCAACTATCCGCATAAGCTTACATCTAAAAATAACATAAAAAAAGTGAAAAAAGAGACTGTCGATTTCGCTAATCG
GGGAATGACTTTTGAAAAAATGATTAACGACACCAATGACTATTACCTTAGCCGTGGATTAGCTGTTATTCATAAAAAGC
CTACACCCGTGCAAATTGTCAAAGTTGATTATCCTAAGCGAAGCCGTGCCAAGATTGTCGAGGCCTACTTTCGCCAAGCA
TCTACTACGGACTACTCAGGAGTTTACCGTGGGCATTATATTGACTTTGAAGCCAAGGAAACGCGGCAAAAACAATCCAT
GCCTATGAAGAACTTTCATGCACACCAGATTGAGCATATGAATCAAGTGCTCAATCAAGGCGGAATTTGCTTTGTCTTAC
TTCACTTTTCTAGCCTGAAGGAAACCTACCTCCTTCCTGCTCCCTACTTAATTGAGTTTTACAAGATTGATAAGGGTGGG
AAATCCATGCCCCTGGATTATATTCAGAAACATGGTTATCTCATTGAACAAAACATCCTTCCCAGCGTACCTTATCTTGA
TATAATCTCAAAAAATTTACTAGGTGGTCACTCTAATGAATAA
ATGGTCAACTATCCGCATAAGCTTACATCTAAAAATAACATAAAAAAAGTGAAAAAAGAGACTGTCGATTTCGCTAATCG
GGGAATGACTTTTGAAAAAATGATTAACGACACCAATGACTATTACCTTAGCCGTGGATTAGCTGTTATTCATAAAAAGC
CTACACCCGTGCAAATTGTCAAAGTTGATTATCCTAAGCGAAGCCGTGCCAAGATTGTCGAGGCCTACTTTCGCCAAGCA
TCTACTACGGACTACTCAGGAGTTTACCGTGGGCATTATATTGACTTTGAAGCCAAGGAAACGCGGCAAAAACAATCCAT
GCCTATGAAGAACTTTCATGCACACCAGATTGAGCATATGAATCAAGTGCTCAATCAAGGCGGAATTTGCTTTGTCTTAC
TTCACTTTTCTAGCCTGAAGGAAACCTACCTCCTTCCTGCTCCCTACTTAATTGAGTTTTACAAGATTGATAAGGGTGGG
AAATCCATGCCCCTGGATTATATTCAGAAACATGGTTATCTCATTGAACAAAACATCCTTCCCAGCGTACCTTATCTTGA
TATAATCTCAAAAAATTTACTAGGTGGTCACTCTAATGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
49.254 |
100 |
0.495 |