Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   FOB91_RS08645 Genome accession   NZ_CP046328
Coordinates   1778385..1779659 (+) Length   424 a.a.
NCBI ID   WP_065428464.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1773385..1784659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS08625 (FOB91_08625) - 1773659..1775284 (+) 1626 WP_011999886.1 malolactic enzyme -
  FOB91_RS08630 (FOB91_08630) - 1775361..1776308 (+) 948 WP_011999887.1 AEC family transporter -
  FOB91_RS08635 (FOB91_08635) - 1776761..1776907 (-) 147 Protein_1670 site-specific integrase -
  FOB91_RS08640 (FOB91_08640) comE/blpR 1777575..1778309 (+) 735 WP_011999888.1 response regulator transcription factor Regulator
  FOB91_RS08645 (FOB91_08645) comD/blpH 1778385..1779659 (+) 1275 WP_065428464.1 GHKL domain-containing protein Regulator
  FOB91_RS08650 (FOB91_08650) - 1779934..1780614 (+) 681 WP_011999889.1 ATP-binding cassette domain-containing protein -
  FOB91_RS08655 (FOB91_08655) - 1780607..1781326 (+) 720 WP_041789519.1 ABC transporter permease -
  FOB91_RS08660 (FOB91_08660) - 1781678..1781881 (-) 204 WP_011999891.1 CsbD family protein -
  FOB91_RS08665 (FOB91_08665) - 1782063..1782692 (-) 630 WP_011999892.1 DUF421 domain-containing protein -
  FOB91_RS08670 (FOB91_08670) - 1782692..1783144 (-) 453 WP_011999893.1 DUF3290 family protein -
  FOB91_RS08675 (FOB91_08675) - 1783429..1783977 (+) 549 WP_011999894.1 DUF6609 family protein -
  FOB91_RS08680 (FOB91_08680) - 1784106..1784617 (+) 512 Protein_1679 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 424 a.a.        Molecular weight: 49777.94 Da        Isoelectric Point: 7.3740

>NTDB_id=350439 FOB91_RS08645 WP_065428464.1 1778385..1779659(+) (comD/blpH) [Streptococcus gordonii strain FDAARGOS_683]
MLYQQITGDKVRFYLYFLLPIIFRVLFYIVPPIGYFSSLLFWLFYSLYKNKFSNRTLAVFFGLYPVVVESLFSRVIAFDL
LPMFGISINITNKFPVLSLLIELLIFPTFYYLTKTIQIDFKNLQIGFSKNQLKYYLLTFDISMAFYFILLQIFSIFTDVI
PNALKLRENLVGIYVIYFLIMLIFLHSKITDEIDRELKEQKDNQLQNLEKYSSHIESLYEEIRLFRHDYINIITSIKSGI
ELNDIASIQNVYDTVLSKTVKDFSDRKYDIANLSKIENTALKSVLSAKLLEAYNKGVEIAIEVDGRQDLYSFELLDFITI
ISILLDNAIEATLLSKDPEINIAIFSHNDRFYFIVENKTKEESVNRNNIFKNGFSTKGEERGIGLYKVTQILDKYPSASI
RTQSFSYVFRQTIEIQKNYRFSYL

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=350439 FOB91_RS08645 WP_065428464.1 1778385..1779659(+) (comD/blpH) [Streptococcus gordonii strain FDAARGOS_683]
ATGCTATATCAACAAATTACAGGGGACAAGGTACGTTTTTATCTTTATTTTCTATTACCAATCATTTTTAGAGTATTATT
TTATATTGTTCCACCAATAGGATATTTTTCTTCATTATTATTTTGGTTATTTTACTCATTATATAAAAATAAATTTAGTA
ATCGGACATTAGCTGTATTCTTTGGTCTGTATCCAGTGGTTGTCGAGAGTTTATTTAGTAGGGTTATTGCATTTGATTTA
TTACCGATGTTTGGTATATCAATAAATATTACAAATAAATTTCCGGTATTATCACTATTAATTGAACTATTAATATTTCC
AACATTTTATTATTTGACTAAAACTATCCAGATTGACTTTAAAAATTTGCAAATTGGGTTTTCTAAAAATCAATTAAAAT
ATTATTTGTTAACATTTGATATTTCAATGGCATTTTATTTTATATTGCTTCAAATTTTTTCTATTTTTACAGACGTGATT
CCAAATGCACTTAAATTAAGAGAGAATTTAGTAGGGATATACGTCATTTACTTTCTAATTATGCTAATTTTTTTGCATTC
TAAGATCACTGATGAGATTGATAGAGAGTTGAAAGAGCAGAAAGATAACCAACTTCAGAACTTAGAAAAATATAGTAGTC
ACATTGAGTCCTTATATGAGGAGATACGATTATTTAGGCATGACTATATAAACATTATTACAAGTATAAAATCAGGTATT
GAGTTAAACGATATAGCATCTATTCAGAATGTATATGATACAGTTTTATCAAAAACCGTAAAAGATTTTTCGGATAGAAA
ATACGATATTGCTAATCTTTCCAAAATTGAAAACACTGCCCTAAAAAGTGTCTTATCAGCAAAATTACTTGAGGCTTATA
ATAAGGGGGTTGAAATTGCTATAGAGGTGGATGGTAGGCAAGATTTATATTCATTTGAATTGCTAGATTTTATTACAATT
ATTTCAATTCTTTTAGATAATGCCATAGAAGCAACATTATTATCAAAAGATCCGGAAATTAACATTGCTATTTTTTCTCA
TAATGATAGATTTTATTTTATAGTTGAAAATAAGACAAAGGAGGAAAGTGTAAATAGGAATAATATTTTTAAAAATGGTT
TTTCAACAAAAGGTGAAGAACGAGGGATAGGGTTATATAAAGTGACACAGATTTTAGATAAGTATCCTAGTGCATCTATT
AGAACTCAAAGTTTTTCATATGTGTTTAGACAGACAATAGAAATACAAAAAAACTACAGATTTAGTTATCTGTAG

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(315-416)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

39.44

92.689

0.366