Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | FOB91_RS02400 | Genome accession | NZ_CP046328 |
| Coordinates | 490119..491231 (-) | Length | 370 a.a. |
| NCBI ID | WP_012000665.1 | Uniprot ID | A8AXP5 |
| Organism | Streptococcus gordonii strain FDAARGOS_683 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 485119..496231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB91_RS02365 (FOB91_02365) | mnmE | 485348..486721 (+) | 1374 | WP_012000661.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| FOB91_RS02370 (FOB91_02370) | - | 486872..487441 (-) | 570 | WP_041789701.1 | TlpA family protein disulfide reductase | - |
| FOB91_RS02375 (FOB91_02375) | - | 487881..488579 (-) | 699 | WP_012000663.1 | LrgB family protein | - |
| FOB91_RS02380 (FOB91_02380) | - | 488572..488952 (-) | 381 | WP_008809214.1 | CidA/LrgA family protein | - |
| FOB91_RS02395 (FOB91_02395) | - | 489728..490066 (-) | 339 | WP_012000664.1 | metal-sulfur cluster assembly factor | - |
| FOB91_RS02400 (FOB91_02400) | rpoS | 490119..491231 (-) | 1113 | WP_012000665.1 | RNA polymerase sigma factor RpoD | Regulator |
| FOB91_RS02405 (FOB91_02405) | dnaG | 491234..493015 (-) | 1782 | WP_012000666.1 | DNA primase | - |
| FOB91_RS02410 (FOB91_02410) | mscL | 493221..493601 (+) | 381 | WP_012000667.1 | large conductance mechanosensitive channel protein MscL | - |
| FOB91_RS02415 (FOB91_02415) | rpsU | 493709..493885 (-) | 177 | WP_000048054.1 | 30S ribosomal protein S21 | - |
| FOB91_RS02420 (FOB91_02420) | - | 494012..494695 (-) | 684 | WP_012000668.1 | DUF4956 domain-containing protein | - |
| FOB91_RS02425 (FOB91_02425) | - | 494706..495437 (-) | 732 | Protein_479 | polyphosphate polymerase domain-containing protein | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 42403.10 Da Isoelectric Point: 4.5140
>NTDB_id=350366 FOB91_RS02400 WP_012000665.1 490119..491231(-) (rpoS) [Streptococcus gordonii strain FDAARGOS_683]
MATKQKEVTTFDVQVAEFIRNHKKAGTVIDDEINDKLIIPFTLDADGIEDLLQRIQDAGISITDKEGNPSARVLHNEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAILVEQGDTEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
MATKQKEVTTFDVQVAEFIRNHKKAGTVIDDEINDKLIIPFTLDADGIEDLLQRIQDAGISITDKEGNPSARVLHNEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAILVEQGDTEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
Nucleotide
Download Length: 1113 bp
>NTDB_id=350366 FOB91_RS02400 WP_012000665.1 490119..491231(-) (rpoS) [Streptococcus gordonii strain FDAARGOS_683]
ATGGCTACAAAACAAAAAGAAGTAACAACATTTGACGTACAAGTTGCAGAATTTATTCGAAACCATAAAAAGGCTGGTAC
GGTAATTGATGATGAAATTAATGATAAATTGATTATTCCTTTTACCTTAGATGCAGATGGTATCGAAGATTTGTTGCAAC
GTATTCAAGATGCAGGGATTTCTATTACAGATAAAGAAGGGAATCCAAGTGCACGTGTTTTACACAACGAAGAGGAAGAA
GCAGAGCTAACTGATGAAGAACTTTTAGGTAGCAATTCAGCTAAAGTCAACGATCCTGTTCGTATGTATCTGAAAGAAAT
TGGAGTCGTTCCACTTTTGACAAACGAAGAAGAGCAAGAATTGGCAATCTTGGTAGAGCAGGGCGATACTGAGGCTAAGC
AACGTTTGGCTGAAGCCAACCTTCGCTTGGTAGTTTCTATTGCTAAACGTTATGTTGGACGTGGCATGCAGTTCCTTGAC
TTGATCCAAGAAGGAAATATGGGCTTGATGAAGGCCGTTGACAAGTTTGACTATACCAAAGGATTTAAGTTTTCAACGTA
TGCAACTTGGTGGATCCGTCAGGCCATTACCCGTGCGATTGCTGACCAAGCTAGAACAATCCGAATCCCAGTTCACATGG
TAGAAACGATTAATAAGCTAGTTCGTGAGCAACGCAATCTCTTGCAAGAATTAGGCCAAGATCCAACGCCTGAGCAGATT
GCTGAGCGTATGGATATGACACCAGATAAGGTTCGTGAGATTCTCAAGATTGCCCAGGAGCCAGTTTCTCTGGAAACACC
TATCGGTGAGGAAGATGATAGCCATCTGGGTGACTTTATCGAAGACGAAGTAATTGAAAATCCAGTTGATTACACAACTC
GTGTTGTTCTTCGTGAGCAGCTGGATGAAGTTTTAGACACTCTTACAGATCGTGAAGAAAATGTTCTTCGTCTGCGTTTT
GGTTTGGATGATGGTAAAATGCGGACCTTGGAAGATGTTGGTAAAGTTTTCAATGTGACACGTGAACGCATTCGCCAAAT
TGAAGCTAAAGCTCTACGTAAACTACGCCACCCAAGCCGTAGCAAGCCACTCCGTGATTTCATTGAAGATTAA
ATGGCTACAAAACAAAAAGAAGTAACAACATTTGACGTACAAGTTGCAGAATTTATTCGAAACCATAAAAAGGCTGGTAC
GGTAATTGATGATGAAATTAATGATAAATTGATTATTCCTTTTACCTTAGATGCAGATGGTATCGAAGATTTGTTGCAAC
GTATTCAAGATGCAGGGATTTCTATTACAGATAAAGAAGGGAATCCAAGTGCACGTGTTTTACACAACGAAGAGGAAGAA
GCAGAGCTAACTGATGAAGAACTTTTAGGTAGCAATTCAGCTAAAGTCAACGATCCTGTTCGTATGTATCTGAAAGAAAT
TGGAGTCGTTCCACTTTTGACAAACGAAGAAGAGCAAGAATTGGCAATCTTGGTAGAGCAGGGCGATACTGAGGCTAAGC
AACGTTTGGCTGAAGCCAACCTTCGCTTGGTAGTTTCTATTGCTAAACGTTATGTTGGACGTGGCATGCAGTTCCTTGAC
TTGATCCAAGAAGGAAATATGGGCTTGATGAAGGCCGTTGACAAGTTTGACTATACCAAAGGATTTAAGTTTTCAACGTA
TGCAACTTGGTGGATCCGTCAGGCCATTACCCGTGCGATTGCTGACCAAGCTAGAACAATCCGAATCCCAGTTCACATGG
TAGAAACGATTAATAAGCTAGTTCGTGAGCAACGCAATCTCTTGCAAGAATTAGGCCAAGATCCAACGCCTGAGCAGATT
GCTGAGCGTATGGATATGACACCAGATAAGGTTCGTGAGATTCTCAAGATTGCCCAGGAGCCAGTTTCTCTGGAAACACC
TATCGGTGAGGAAGATGATAGCCATCTGGGTGACTTTATCGAAGACGAAGTAATTGAAAATCCAGTTGATTACACAACTC
GTGTTGTTCTTCGTGAGCAGCTGGATGAAGTTTTAGACACTCTTACAGATCGTGAAGAAAATGTTCTTCGTCTGCGTTTT
GGTTTGGATGATGGTAAAATGCGGACCTTGGAAGATGTTGGTAAAGTTTTCAATGTGACACGTGAACGCATTCGCCAAAT
TGAAGCTAAAGCTCTACGTAAACTACGCCACCCAAGCCGTAGCAAGCCACTCCGTGATTTCATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
46.918 |
78.919 |
0.37 |