Detailed information NTG0350261

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GK046_RS11945
• Genome accession: NZ_CP046259
• Coordinates: 2460779..2461762 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain ECO2947
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2455779..2466762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GK046_RS11920 (GK046_11920)	-	2456928..2457035 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GK046_RS11925 (GK046_11925)	-	2457411..2457518 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GK046_RS11930 (GK046_11930)	-	2457894..2458001 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GK046_RS11935 (GK046_11935)	yhjV	2458477..2459748 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
GK046_RS11940 (GK046_11940)	dppF	2459778..2460782 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GK046_RS11945 (GK046_11945)	amiE	2460779..2461762 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
GK046_RS11950 (GK046_11950)	dppC	2461773..2462675 (-)	903	WP_000084680.1	dipeptide ABC transporter permease DppC	-
GK046_RS11955 (GK046_11955)	dppB	2462685..2463704 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
GK046_RS11960 (GK046_11960)	dppA	2464012..2465619 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=350261 GK046_RS11945 WP_001196496.1 2460779..2461762(-) (amiE) [Escherichia coli strain ECO2947]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=350261 GK046_RS11945 WP_001196496.1 2460779..2461762(-) (amiE) [Escherichia coli strain ECO2947]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGTTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTACTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401