Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GKC13_RS07045 Genome accession   NZ_CP046134
Coordinates   1358263..1359069 (-) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MAG_rmk202_sterm     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1353263..1364069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKC13_RS07010 - 1353275..1353745 (+) 471 Protein_1393 YgjV family protein -
  GKC13_RS07015 (GKC13_07100) - 1353764..1354585 (-) 822 WP_179971219.1 Cof-type HAD-IIB family hydrolase -
  GKC13_RS07020 (GKC13_07105) - 1354608..1355264 (-) 657 WP_179971218.1 glycoside hydrolase family 73 protein -
  GKC13_RS07025 (GKC13_07110) - 1355362..1355703 (-) 342 WP_084828553.1 P-II family nitrogen regulator -
  GKC13_RS07030 (GKC13_07115) - 1355714..1356949 (-) 1236 WP_179971217.1 ammonium transporter -
  GKC13_RS07035 (GKC13_07120) rsmI 1357087..1357953 (-) 867 WP_024704223.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GKC13_RS07040 (GKC13_07125) yabA 1357956..1358276 (-) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  GKC13_RS07045 (GKC13_07130) yaaT 1358263..1359069 (-) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  GKC13_RS07050 (GKC13_07135) - 1359066..1359941 (-) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  GKC13_RS07055 (GKC13_07140) tmk 1359950..1360579 (-) 630 WP_002946312.1 dTMP kinase -
  GKC13_RS07060 (GKC13_07145) tpiA 1360819..1361577 (-) 759 WP_002946314.1 triose-phosphate isomerase -
  GKC13_RS07065 (GKC13_07150) tuf 1361826..1363022 (-) 1197 WP_002949971.1 elongation factor Tu -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=350190 GKC13_RS07045 WP_011680838.1 1358263..1359069(-) (yaaT) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=350190 GKC13_RS07045 WP_011680838.1 1358263..1359069(-) (yaaT) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414