Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GKC13_RS04315 Genome accession   NZ_CP046134
Coordinates   829875..830357 (+) Length   160 a.a.
NCBI ID   WP_082308976.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MAG_rmk202_sterm     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 824875..835357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKC13_RS04295 (GKC13_04330) queG 825748..826866 (+) 1119 WP_084829636.1 tRNA epoxyqueuosine(34) reductase QueG -
  GKC13_RS04300 (GKC13_04335) prfB 826919..828017 (+) 1099 WP_207559803.1 peptide chain release factor 2 -
  GKC13_RS04305 (GKC13_04340) ftsE 828105..828797 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  GKC13_RS04310 (GKC13_04345) ftsX 828790..829719 (+) 930 WP_084829635.1 permease-like cell division protein FtsX -
  GKC13_RS04315 (GKC13_04350) mutX 829875..830357 (+) 483 WP_082308976.1 8-oxo-dGTP diphosphatase Machinery gene
  GKC13_RS04320 (GKC13_04355) - 830368..831546 (+) 1179 WP_207559802.1 AI-2E family transporter -
  GKC13_RS04325 (GKC13_04360) - 831536..832765 (+) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  GKC13_RS04330 (GKC13_04365) lepB 832888..833445 (+) 558 WP_011681191.1 signal peptidase I -
  GKC13_RS04335 (GKC13_04370) pepT 833653..834876 (+) 1224 WP_014608366.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18842.29 Da        Isoelectric Point: 4.6250

>NTDB_id=350175 GKC13_RS04315 WP_082308976.1 829875..830357(+) (mutX) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDT

Nucleotide


Download         Length: 483 bp        

>NTDB_id=350175 GKC13_RS04315 WP_082308976.1 829875..830357(+) (mutX) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTTCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATACA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment