Detailed information NTG0350087

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: GJV39_RS06435
• Genome accession: NZ_CP046114
• Coordinates: 1229692..1232520 (+)
• Length: 942 a.a.
• NCBI ID: WP_021109498.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SCW0912
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1224692..1237520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV39_RS06405 (GJV39_06405)	-	1225214..1225492 (+)	279	WP_010786777.1	type II toxin-antitoxin system RelE/ParE family toxin	-
GJV39_RS06410 (GJV39_06410)	-	1225503..1225775 (+)	273	WP_005712616.1	HigA family addiction module antitoxin	-
GJV39_RS06415 (GJV39_06415)	rhlB	1225839..1227059 (+)	1221	WP_005712618.1	ATP-dependent RNA helicase RhlB	-
GJV39_RS06420 (GJV39_06420)	-	1227069..1227377 (+)	309	Protein_1260	helicase HerA-like domain-containing protein	-
GJV39_RS06425 (GJV39_06425)	-	1227449..1228663 (-)	1215	WP_021109499.1	ATP-binding protein	-
GJV39_RS06430 (GJV39_06430)	ssb	1228871..1229389 (-)	519	WP_012621700.1	single-stranded DNA-binding protein	Machinery gene
GJV39_RS06435 (GJV39_06435)	uvrA	1229692..1232520 (+)	2829	WP_021109498.1	excinuclease ABC subunit UvrA	Machinery gene
GJV39_RS06440 (GJV39_06440)	-	1232604..1232984 (+)	381	WP_021109497.1	YacL family protein	-
GJV39_RS06445 (GJV39_06445)	-	1232950..1233201 (+)	252	WP_021109496.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104493.04 Da
• Isoelectric Point: 6.7392

>NTDB_id=350087 GJV39_RS06435 WP_021109498.1 1229692..1232520(+) (uvrA) [Glaesserella parasuis strain SCW0912]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRNDIATRLAQSFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRVCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMVADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=350087 GJV39_RS06435 WP_021109498.1 1229692..1232520(+) (uvrA) [Glaesserella parasuis strain SCW0912]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACTCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGTCAGTTCTTGTCTTTAATGGAAAAGCCTGATGTCGATCACATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCACACAATCCTCGTTCTACGGTAGGGACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACAATTTCGC
AAATGGTGGATAGAGTTCTGGAAGAGCCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCAAAACTTGAATTGCAGAAAAAACATACGATTGAAGTGGTGATTGATCGTTTTAAAGTGCGAAACGATATTG
CGACCCGTTTAGCGCAGTCCTTTGAAACGGCATTGGAACTTTCTGGCTCAACGGCGATTATTGCCGATATGGACGATCCA
AATGCGGAAGAGTTAGTGTTTTCGTCAAGTTTTGCTTGCTCTCATTGTGGCTATTCGCTGACGGAACTAGAACCACGCCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAACCCTGATGTGTCTTTAGCAAGCGGTGCGATTAAGGGCTGGGATCGCCGTAGTTTCTACTATTTCGGTTTA
TTGAAATCGGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAACATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGTTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTGTTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGCGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATCGGTGCTGGGTTAGTGGGGGT
GATGTATGTGCTTGATGAACCGTCTATTGGCTTGCATCAGCGAGATAACGAACGTTTATTGAACACTCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGTGGCAGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGCGGTCAGATTATTGCTCAAGGCACAGCTCAAGAAATTATGCAAAATGAAGCATCGATTAC
GGGTAAATTCTTATCTGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGAGCAAGCGGTAATAACTTAAAAGAAGTCGATTTAGCTATTCCTGTTGGCTTGTTTACTTGTATTACAGGGGTA
TCGGGGTCGGGCAAATCTACCTTAATTAACGACACCTTATTCCCGATTGCTCAAAATGCGTTAAATCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGATGGCTTGGCACATTTTGACAAAGTAATCGACATCAATCAAAGTCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGCTATACGGTCGGACGTTTCAGCTTTAACGTTCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCTAAACGTGATACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACGGGATTGCACTTCGCCGACATTAAACAATTATTGACCGTATTACACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACCGCAGACTGGATTGTCGATTTAGGCCCTGAAGG
CGGTAGCGGCGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae TIGR4	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae D39	56.976	99.682	0.568