Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMO_RS07180 Genome accession   NC_013016
Coordinates   1383958..1384419 (+) Length   153 a.a.
NCBI ID   WP_014582139.1    Uniprot ID   -
Organism   Neisseria meningitidis alpha14     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378958..1389419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS07155 (NMO_1304) - 1379982..1380191 (-) 210 WP_002212949.1 tautomerase family protein -
  NMO_RS07160 (NMO_1305) - 1380535..1381314 (+) 780 WP_015815713.1 DUF4198 domain-containing protein -
  NMO_RS14315 (NMO_1306) - 1381299..1381499 (-) 201 WP_162470154.1 hypothetical protein -
  NMO_RS07165 (NMO_1307) - 1381503..1382768 (-) 1266 WP_015815715.1 Glu/Leu/Phe/Val family dehydrogenase -
  NMO_RS07175 (NMO_1308) - 1383175..1383885 (+) 711 WP_015815716.1 phosphoglycolate phosphatase -
  NMO_RS07180 (NMO_1309) recX 1383958..1384419 (+) 462 WP_014582139.1 recombination regulator RecX Regulator
  NMO_RS14455 (NMO_1310) - 1384493..1384654 (+) 162 WP_015815718.1 hypothetical protein -
  NMO_RS07195 (NMO_1311) - 1384807..1385289 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  NMO_RS07200 (NMO_1312) - 1385650..1386897 (-) 1248 WP_002239875.1 M23 family metallopeptidase -
  NMO_RS07205 (NMO_1313) surE 1387153..1387899 (-) 747 WP_002238115.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17743.07 Da        Isoelectric Point: 10.0248

>NTDB_id=34978 NMO_RS07180 WP_014582139.1 1383958..1384419(+) (recX) [Neisseria meningitidis alpha14]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPYAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=34978 NMO_RS07180 WP_014582139.1 1383958..1384419(+) (recX) [Neisseria meningitidis alpha14]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGTACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974

Multiple sequence alignment