Detailed information NTG0349722

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GJ664_RS07500
• Genome accession: NZ_CP046037
• Coordinates: 1509548..1510903 (+)
• Length: 451 a.a.
• NCBI ID: WP_154255262.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain CBA3614
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1504548..1515903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJ664_RS07490 (GJ664_07490)	rnc	1505234..1505941 (+)	708	WP_016264875.1	ribonuclease III	-
GJ664_RS07495 (GJ664_07495)	smc	1505977..1509537 (+)	3561	WP_094365690.1	chromosome segregation protein SMC	-
GJ664_RS07500 (GJ664_07500)	pilA	1509548..1510903 (+)	1356	WP_154255262.1	signal recognition particle-docking protein FtsY	Machinery gene
GJ664_RS07505 (GJ664_07505)	-	1510900..1511679 (+)	780	WP_025015859.1	alpha/beta fold hydrolase	-
GJ664_RS07510 (GJ664_07510)	-	1511731..1512678 (-)	948	WP_025015858.1	sugar-binding transcriptional regulator	-
GJ664_RS07515 (GJ664_07515)	-	1512843..1513982 (+)	1140	WP_035146302.1	NAD(P)-dependent malic enzyme	-
GJ664_RS07520 (GJ664_07520)	-	1514007..1515326 (+)	1320	WP_016264881.1	2-hydroxycarboxylate transporter family protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 49062.85 Da
• Isoelectric Point: 4.1314

>NTDB_id=349722 GJ664_RS07500 WP_154255262.1 1509548..1510903(+) (pilA) [Latilactobacillus sakei strain CBA3614]
MGLFDRIKKAFTLEPEKEPENVDEQATTAEKEADDPAEKSTEKLDDSTGETDSGETPETPETPVEEPTEPVVAETPTPVE
PEPEVAEPEATAAPEEAVIVTDEPAVSEEATVADDAEAEPVQAAQTEKYDQGLEKSRKTFGQRLNALFANFRSVDESFFD
DVEEMLIEADVGYETAMKIADELREEVKLRNVKKPEAVSQAIVEKLVDLYGQEGQQEDNELHFAPEGELTVFLFVGVNGA
GKTTSIGKFAHQLEKAGKKVLLAAGDTFRAGAIEQLQEWGRRVSVPVVANKAGSDPAAVAFDAVKRAKEENFDVLLVDTA
GRLQNNVNLMKELEKVKRVITREIPSAPQEVLLVLDATTGQNALVQAKQFKSTTDVTGIVLTKLDGSAKGGIVLAVRTEL
HLPVKMVGLGEQMNDLQLFDPNRFVYGLFKDIIVGDGPQSEIDTDVSQAIK

Nucleotide

• Length: 1356 bp

>NTDB_id=349722 GJ664_RS07500 WP_154255262.1 1509548..1510903(+) (pilA) [Latilactobacillus sakei strain CBA3614]
ATGGGATTATTTGATCGCATTAAAAAAGCATTCACGTTAGAACCAGAAAAAGAACCGGAAAACGTCGACGAACAAGCAAC
GACTGCTGAAAAGGAAGCTGACGATCCAGCTGAAAAATCGACAGAAAAGCTTGACGATTCAACCGGCGAGACCGATTCTG
GAGAAACACCAGAAACACCAGAAACACCAGTCGAAGAACCAACTGAACCAGTGGTCGCAGAAACACCAACACCAGTTGAA
CCAGAACCGGAAGTTGCTGAACCTGAAGCAACAGCAGCGCCTGAAGAGGCAGTTATTGTTACTGATGAACCAGCAGTTTC
AGAAGAAGCAACGGTGGCAGACGATGCGGAAGCCGAACCGGTTCAAGCAGCTCAAACTGAAAAATATGATCAAGGTTTAG
AAAAATCACGGAAGACTTTTGGACAACGGTTGAACGCCTTGTTCGCTAACTTCAGAAGTGTCGATGAATCTTTCTTTGAC
GACGTTGAAGAAATGTTAATCGAAGCCGATGTTGGTTATGAAACAGCAATGAAAATTGCAGACGAATTACGTGAAGAAGT
GAAGTTACGCAACGTTAAGAAACCAGAAGCCGTTTCACAAGCGATTGTTGAAAAATTAGTCGATTTATACGGTCAAGAAG
GACAACAAGAAGATAATGAATTACATTTCGCCCCAGAAGGTGAATTGACAGTCTTTCTTTTCGTCGGCGTTAACGGTGCC
GGCAAGACAACTTCAATCGGGAAGTTTGCTCACCAACTGGAAAAAGCCGGTAAGAAGGTCTTACTTGCCGCTGGTGATAC
GTTTAGAGCGGGTGCAATCGAACAGTTGCAAGAATGGGGCCGCCGCGTTTCAGTACCAGTGGTCGCTAATAAAGCAGGCA
GTGATCCAGCCGCCGTTGCTTTTGATGCCGTTAAGCGGGCTAAAGAAGAAAACTTTGACGTCTTATTAGTTGATACGGCT
GGTCGTTTGCAAAATAACGTCAACTTGATGAAGGAACTTGAAAAGGTGAAACGCGTGATTACGCGTGAAATCCCAAGCGC
CCCTCAAGAGGTCTTGTTAGTATTAGACGCAACGACTGGGCAAAACGCCTTGGTTCAAGCTAAACAATTTAAATCAACCA
CTGACGTCACCGGAATTGTGTTAACAAAACTGGACGGCTCTGCTAAAGGTGGGATTGTCCTTGCTGTTCGGACAGAGCTA
CACTTGCCAGTTAAGATGGTTGGTCTAGGTGAACAAATGAATGACTTACAATTATTCGATCCTAACCGCTTTGTTTACGG
TTTATTCAAAGACATTATTGTCGGGGATGGCCCACAAAGTGAGATTGATACGGATGTTAGTCAGGCGATTAAATGA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (140-206)

• SRP54-type protein, GTPase domain (SRP54) (230-429)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	38.636	97.561	0.377