Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   E0Z08_RS05145 Genome accession   NZ_CP037424
Coordinates   1079204..1083685 (+) Length   1493 a.a.
NCBI ID   WP_094148349.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain M19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1074204..1088685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0Z08_RS05120 (E0Z08_05120) - 1074674..1075312 (-) 639 WP_094148348.1 hypothetical protein -
  E0Z08_RS05125 (E0Z08_05125) pilG 1075593..1075976 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  E0Z08_RS05130 (E0Z08_05130) - 1076004..1076372 (+) 369 WP_004694491.1 response regulator -
  E0Z08_RS05135 (E0Z08_05135) - 1076378..1076914 (+) 537 WP_004694490.1 chemotaxis protein CheW -
  E0Z08_RS05140 (E0Z08_05140) - 1076965..1079037 (+) 2073 WP_058952135.1 methyl-accepting chemotaxis protein -
  E0Z08_RS05145 (E0Z08_05145) chpA 1079204..1083685 (+) 4482 WP_094148349.1 Hpt domain-containing protein Regulator
  E0Z08_RS05150 (E0Z08_05150) - 1083690..1084145 (+) 456 WP_058952133.1 hypothetical protein -
  E0Z08_RS05155 (E0Z08_05155) dapE 1084211..1085344 (-) 1134 WP_058952132.1 succinyl-diaminopimelate desuccinylase -
  E0Z08_RS05160 (E0Z08_05160) - 1085463..1085609 (-) 147 WP_058952131.1 entericidin A/B family lipoprotein -
  E0Z08_RS05165 (E0Z08_05165) - 1085767..1086645 (-) 879 WP_058952130.1 DUF1853 family protein -
  E0Z08_RS05170 (E0Z08_05170) - 1086743..1087135 (+) 393 WP_058952129.1 YbaN family protein -
  E0Z08_RS05175 (E0Z08_05175) elsL 1087135..1087638 (+) 504 WP_058952128.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1493 a.a.        Molecular weight: 166846.53 Da        Isoelectric Point: 4.4188

>NTDB_id=349688 E0Z08_RS05145 WP_094148349.1 1079204..1083685(+) (chpA) [Acinetobacter johnsonii strain M19]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPTFKEMQKIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELSDIEVAESEPQVADVSEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVADELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATIKVLHNIQSLVEGTTLT
ASASEPLVEAFVKAIEEAQPLVQESLSNVDRTIEVETAAAVESATAIEASSIVENTDVTVVEQLDTPSLVQEEAASLLSI
VEETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYD
PLLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHL
DGGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYAD
FDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQT
ASTLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDAEQRSAAKKSVTGQIELNISRQGTDVIVSFKDDGK
GIDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGFGTTFI
IRVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGH
SLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADH
RDFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHE
IHQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4482 bp        

>NTDB_id=349688 E0Z08_RS05145 WP_094148349.1 1079204..1083685(+) (chpA) [Acinetobacter johnsonii strain M19]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATCTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACCTTGTTGAGCATACGCCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGAGCAAAGTCAGCA
GGTGAAACAGCATGGGCGGTTGAAGATACCTTAAACCGTGTGATTTCAGGGGCTGTACCGCTTACGGCAACGGTTCAAAA
ATTTGCTAAAACAGTATTTAAACTGTATCAATTTAAACTGTACCCGACTTTTAAAGAGATGCAGAAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGGATTAGAGCTGAGCGATATCGAAGTGGCTGAATCTGAGCCACAAGT
TGCAGACGTTTCTGAGCAGGATGATCAAGTGCATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGTTTAATCCGGGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTTGAAAATCTATTTAA
AACTTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGACT
ATTTACACGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGCTGATGAGCTAAACCCACAAGGTATGGTTTCGAAGCTGATCGAGTTAAATATTGATCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCGGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGACTATGCATATGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGTGTTATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCGATTTTGATGATGATTTGCTCGATATCTTCTTGGAAGAAGCCGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATACAGCAGCGCTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACGG
AGAAGGTTGATTACCCAGCAACAGCGACCATTAAGGTATTGCATAACATTCAGAGCTTGGTTGAGGGTACGACTCTTACC
GCTTCAGCATCTGAGCCTTTGGTTGAGGCGTTTGTTAAAGCAATTGAAGAGGCTCAGCCTCTAGTTCAAGAATCTTTATC
TAATGTAGATAGAACGATTGAAGTTGAAACAGCTGCTGCTGTTGAGTCAGCAACTGCAATTGAAGCGTCAAGTATAGTTG
AAAACACGGACGTTACTGTCGTTGAACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGCCAGTCTGTTATCAATT
GTTGAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACG
TAGTGACCGTAGTGTGTTACTACAATTGCAACGTGCCGCGCACAGTTTAAAAGGCGGCGCACGTATGGCGGAGAATGAAC
CCGTTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGAC
CCATTATTGCAAACCGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTTAGTAATTATGATGGTTTGAAAAA
CAGCTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTTAATGCGG
TACCAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTG
GATGGTGGTAATGAAATGATTCGTATCTCAGCTGATTTGGTTGAGAAAATGATCGACCTGTCCGGTGAAAATGCGATTAA
CCGTTCACGTATTGAGATGGACTTAGGTCAGCTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGG
ATCAGTTGCGTCGAATGGAAGGTGAGCTTGAGAGTCAAATTATTGCGAAGCACGGTTCTGAAAACTCGCGCTACGCAGAC
TTTGACCCCTTGGAAATGGACCAATATTCATCGCTGAATCAATTGTCTAAATCCTTAGCCGAATCAGCTTCGGATTTGGT
CGACTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTACAACAATCCCGTATTCAAGCAGAGA
TTCAAGAAAGCTTAATGCGGACACGTTTGGTACCGTTCTCACGTATGCTGCCTCGTTTGCAACGTATTGTACGTCAGACC
GCATCAACTTTGAACCGTCCAACGGAATTGGTCGTCCATAACACCGAAGGTGAGTTGGACCGTACGATTCTTGAACGTTT
GGTTACGCCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATGCGGAACAACGTAGTGCTGCGAAAA
AATCAGTGACAGGCCAAATTGAACTAAACATTAGCCGTCAAGGTACAGACGTTATCGTCAGCTTTAAAGATGATGGTAAA
GGTATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAACTTAGGTTTAATTAAAGCCGATCAAGTGTTGGATAAACAGGA
AATCTTACAGTTTATTTTCCATCCGGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTTGGTCTTG
ATGTGGTACAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGATTCGGTACGACCTTCATT
ATTCGCGTACCGACTACGGTAGCGGTGAGTGATGCGTTGATGGTGAAAGCCGGTGATCAACAATATGCGATTCCATTGGC
GCAGATTGATCGTATTGTGCGTATTGCTCCAACAGCACTGGATCACTATTTCCACAGCAAAGATGACCAATTTAAAATTG
ATGGTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCGCGTTTGAGTAATATTGGACAT
TCATTGCCGGTGTTATTGATTAAAGGCAATAGTGGACAAACCATTGCATTGTTGGTTGATCAGCTGATTGGTTCACGTGC
GCAAATTGTAGTGAAGCCAGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGGGTGCAACGATCTTGGGTGATGGCC
ATGTGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTAACGCATGCCGCCGATCAT
CGTGACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGTGGATGACTCGGTTACGGTACGTAAGGTCACATC
GCGCTTATTAGAGCGTCAAGGCTTTGATATTGTGACTGCAAAAGACGGTGTCGATGCGATGGAGCAGCTGGAGAGCGTTA
AGCCAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTTGAAGTAACGAACTTGGTTCGTCACCACGAA
ATTCACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGCGT
GACGCACTACATGGGCAAACCATTCCAAGAGGCAGAGTTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.634

100

0.615


Multiple sequence alignment