Detailed information NTG0349664

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EYS44_RS18375
• Genome accession: NZ_CP037417
• Coordinates: 3693739..3694884 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LB002
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3688739..3699884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYS44_RS18355 (EYS44_18350)	-	3689214..3689930 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
EYS44_RS18360 (EYS44_18355)	narK	3690028..3691218 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
EYS44_RS18365 (EYS44_18360)	argS	3691352..3693022 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
EYS44_RS18370 (EYS44_18365)	-	3693019..3693447 (-)	429	WP_003151069.1	DUF1934 family protein	-
EYS44_RS18375 (EYS44_18370)	rapF	3693739..3694884 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
EYS44_RS18380 (EYS44_18375)	-	3694868..3694987 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
EYS44_RS18385 (EYS44_18380)	speB	3695110..3695547 (-)	438	Protein_3549	agmatinase	-
EYS44_RS18390 (EYS44_18385)	-	3695709..3697136 (-)	1428	WP_046341451.1	DUF885 family protein	-
EYS44_RS18395 (EYS44_18390)	-	3697137..3698477 (-)	1341	WP_025853604.1	MATE family efflux transporter	-
EYS44_RS18400 (EYS44_18395)	-	3698474..3699529 (-)	1056	WP_046341452.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=349664 EYS44_RS18375 WP_024085922.1 3693739..3694884(+) (rapF) [Bacillus velezensis strain LB002]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=349664 EYS44_RS18375 WP_024085922.1 3693739..3694884(+) (rapF) [Bacillus velezensis strain LB002]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533