Detailed information    

insolico Bioinformatically predicted

Overview

Name   tpc   Type   Machinery gene
Locus tag   NMO_RS03215 Genome accession   NC_013016
Coordinates   629218..630216 (-) Length   332 a.a.
NCBI ID   WP_002214152.1    Uniprot ID   X5F838
Organism   Neisseria meningitidis alpha14     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 624218..635216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS03195 (NMO_0580) - 625700..626326 (-) 627 WP_002243359.1 phosphoribosylanthranilate isomerase -
  NMO_RS03200 (NMO_0581) greB 626385..626876 (-) 492 WP_002243360.1 transcription elongation factor GreB -
  NMO_RS03205 (NMO_0582) purF 626976..628520 (-) 1545 WP_015815371.1 amidophosphoribosyltransferase -
  NMO_RS03210 (NMO_0583) - 628728..629225 (-) 498 WP_015815372.1 CvpA family protein -
  NMO_RS03215 (NMO_0584) tpc 629218..630216 (-) 999 WP_002214152.1 cell division protein FtsN Machinery gene
  NMO_RS03220 (NMO_0585) folC 630229..631503 (-) 1275 WP_002222776.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  NMO_RS03225 (NMO_0586) - 631535..631975 (-) 441 WP_002240395.1 protein YgfX -
  NMO_RS03230 (NMO_0587) - 631980..632339 (-) 360 WP_015815373.1 hypothetical protein -
  NMO_RS03235 (NMO_0588) - 632412..633140 (-) 729 WP_002219584.1 amino acid ABC transporter ATP-binding protein -
  NMO_RS03245 (NMO_0589) rsmA 633313..634092 (-) 780 WP_002229195.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  NMO_RS03250 (NMO_0590) - 634289..634978 (+) 690 WP_002226537.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 332 a.a.        Molecular weight: 35520.89 Da        Isoelectric Point: 10.1759

>NTDB_id=34960 NMO_RS03215 WP_002214152.1 629218..630216(-) (tpc) [Neisseria meningitidis alpha14]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=34960 NMO_RS03215 WP_002214152.1 629218..630216(-) (tpc) [Neisseria meningitidis alpha14]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGCATCGCCGGTCAGGTAACGAATGAATAA

Domains

Predicted by InterproScan.

SPOR domain (SPOR)

(259-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5F838

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.884

100

0.937

Multiple sequence alignment