Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NMO_RS02145 Genome accession   NC_013016
Coordinates   420133..422175 (+) Length   680 a.a.
NCBI ID   WP_015815304.1    Uniprot ID   C6S5D1
Organism   Neisseria meningitidis alpha14     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 415133..427175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS02120 (NMO_0383) - 416165..416340 (+) 176 Protein_396 response regulator -
  NMO_RS02125 (NMO_0384) - 416336..417586 (+) 1251 WP_002221443.1 ATP-binding protein -
  NMO_RS02130 (NMO_0385) rng 417620..419113 (-) 1494 WP_002214463.1 ribonuclease G -
  NMO_RS02135 (NMO_0386) grxC 419326..419583 (+) 258 WP_002221441.1 glutaredoxin 3 -
  NMO_RS02140 (NMO_0387) secB 419604..420047 (+) 444 WP_002229859.1 protein-export chaperone SecB -
  NMO_RS02145 (NMO_0388) recG 420133..422175 (+) 2043 WP_015815304.1 ATP-dependent DNA helicase RecG Machinery gene
  NMO_RS02155 (NMO_0389) argC 423287..424330 (-) 1044 WP_015815305.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  NMO_RS02160 (NMO_0390) - 424327..424608 (-) 282 WP_002221438.1 hypothetical protein -
  NMO_RS02170 (NMO_0391) - 424796..425599 (+) 804 Protein_404 JmjC domain-containing protein -
  NMO_RS14620 (NMO_0392) - 425608..425835 (+) 228 WP_002232975.1 hypothetical protein -
  NMO_RS02180 (NMO_0393) - 425828..426181 (+) 354 WP_048816056.1 hypothetical protein -
  NMO_RS14930 - 426581..427020 (+) 440 Protein_407 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74902.92 Da        Isoelectric Point: 7.8544

>NTDB_id=34958 NMO_RS02145 WP_015815304.1 420133..422175(+) (recG) [Neisseria meningitidis alpha14]
MMSPETRKQLKITDVSAKKLEKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAIGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPSWQRLKFDELLAQQLSMRLARQKRIGGSA
TALSGDGTLTQALRHALPFALTDAQKKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGCDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLNICRKGQQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=34958 NMO_RS02145 WP_015815304.1 420133..422175(+) (recG) [Neisseria meningitidis alpha14]
ATGATGTCGCCCGAAACCCGAAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGAAAAACTCAACCTCCATAC
CGCATGGGATTTGGTGTTGCACCTGCCGTTGCGTTACGAGGATGAGACGCACATCATGCCGATTAAGGATGCGCCGATCG
GCGTGCCGTGTCAGGTCGAGGGCGAAGTCATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGCTCCGGCAGCGTCCTTTTCCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGACGGCGATCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAACTTTCAGACGGCACGCTCCCCTCATGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGGCAGAAGCGTATCGGCGGCTCGGCC
ACAGCATTGAGCGGCGACGGCACATTGACTCAAGCCCTGCGCCATGCGTTGCCGTTTGCCCTGACCGATGCACAAAAAAA
AGTTGTTTCCGAAATTTGCCGCGATATGGCACAAACCTATCCCATGCACCGCCTGTTACAAGGCGATGTCGGCAGCGGTA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGCGCGCAGGTGGCTGTAATGGCGCCGACCGAAATC
CTTGCCGAACAGCACTTTATCAAGTTCAAACAATGGCTCGAACCCTTAGGTCTCGAAGTCGTTTGGCTTTCCGGCAGCCA
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAGCAACACCGCTTCGGCGTCGCCCAACGCCTC
GCCCTCAAAAACAAAGGGTGCGACGTCCACCAGTTGATGATGTCCGCCACCCCCATCCCGCGCACGCTTGCCATGAGTTT
CTTCGCCGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGCCGCACCCCGATTAAAACCCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCAACATCTGCCGCAAAGGGCAGCAGGCGTATTGGGTTTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAATGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTGATTTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

RecG wedge domain (RecG_wedge)

(15-164)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C6S5D1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.353

100

0.974

Multiple sequence alignment