Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   EYB46_RS19920 Genome accession   NZ_CP036518
Coordinates   1775448..1775612 (-) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain ANSB01E     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1770448..1780612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYB46_RS20075 - 1772863..1775526 (-) 2664 WP_276320170.1 amino acid adenylation domain-containing protein -
  EYB46_RS19920 comS 1775448..1775612 (-) 165 WP_269194677.1 competence protein ComS Regulator
  EYB46_RS19925 srfAB 1775677..1778721 (-) 3045 Protein_1647 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=349349 EYB46_RS19920 WP_269194677.1 1775448..1775612(-) (comS) [Bacillus velezensis strain ANSB01E]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=349349 EYB46_RS19920 WP_269194677.1 1775448..1775612(-) (comS) [Bacillus velezensis strain ANSB01E]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5


Multiple sequence alignment